PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON98704.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 289aa    MW: 32098.7 Da    PI: 8.6785
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON98704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.0001384106123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 y+C+ C++ F++   L  H+++H
  PON98704.1  84 YTCSFCKREFRSAQALGGHMNVH 106
                 9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MERNSWGNMN NMKEYRRANG SSSSTRSSLD TIRSSDNSNN NNMMVIKNIN PKLAEDHSSW  60
KANNYEEAEE DYMINGFSWP PRSYTCSFCK REFRSAQALG GHMNVHRKDR ARLRQSPPRD  120
HGGYGTIFNL NNPNSSPNPN FSSSFSSVST RLPPLIPYSP LSSNLASPPS LSSLSYSPYF  180
VAKNSSYENK KCTPWSTGME CHADVVLDHP LIMTTKGSEL AKTIKNKQSL NHGVGETKCF  240
AEKDMFKSLN NAETANSTVG LDLEIGLLGD SKTGGRDLDL ELRLGYSPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.13e-25C2H2 family protein