PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON98610.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 495aa MW: 54934.3 Da PI: 6.5927

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON98610.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.6	8.6e-52	46	173	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv +yLk+kv gk++++ ++i+evd+yk+ePwdL k ++k++++e+yfFs dkky +g r nrat++gyWkatg+d++v + ++ PON98610.1 46 LAPGFRFHPTDEELVIYYLKRKVCGKRFRF-NAITEVDVYKSEPWDLAdKsSLKSRDQEYYFFSALDKKYGNGARMNRATSQGYWKATGNDRPVRR-ES 142 579************************9.89**********75347888999*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vglkktLvf++grap+g++t+Wvmheyrl PON98610.1 143 KTVGLKKTLVFHSGRAPDGKRTNWVMHEYRL 173 9**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MGRESLSAQR AMAAAPPPTS PPSLSLSVPS ERTRLAPQAK TQAPTLAPGF RFHPTDEELV 60 IYYLKRKVCG KRFRFNAITE VDVYKSEPWD LADKSSLKSR DQEYYFFSAL DKKYGNGARM 120 NRATSQGYWK ATGNDRPVRR ESKTVGLKKT LVFHSGRAPD GKRTNWVMHE YRLVEEEMER 180 AGGGAGQDAF VLCRIFHKSN IGPPSGQRYA PFIEEEWDDD ESAVVPGMEN EDEVAAGHKT 240 SSGKNNHGAS AEGNSRGTCV ERNANDTHVE GDTIQQNTES IKKDGLRALD LPREDQKVLP 300 LCKIERQDDF QLCVVNREDS LDVRPVPGGD GQQHLPLGAD RLSSPLLMYK RRRHNDTSSS 360 NCNASENSSG ATQDRSSSTT TAATTMSTMT TATRPPTTRN FLSALVEYSL LESIEPKENT 420 PVPPELDAAN LDSSLPPSCL KFIHDLQQEI HQVSIERDTL KFEMMSAQAM INILQSRIEI 480 LNKENSDLKR SSGGV

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MGRESLSAQR AMAAAPPPTS PPSLSLSVPS ERTRLAPQAK TQAPTLAPGF RFHPTDEELV  60
IYYLKRKVCG KRFRFNAITE VDVYKSEPWD LADKSSLKSR DQEYYFFSAL DKKYGNGARM  120
NRATSQGYWK ATGNDRPVRR ESKTVGLKKT LVFHSGRAPD GKRTNWVMHE YRLVEEEMER  180
AGGGAGQDAF VLCRIFHKSN IGPPSGQRYA PFIEEEWDDD ESAVVPGMEN EDEVAAGHKT  240
SSGKNNHGAS AEGNSRGTCV ERNANDTHVE GDTIQQNTES IKKDGLRALD LPREDQKVLP  300
LCKIERQDDF QLCVVNREDS LDVRPVPGGD GQQHLPLGAD RLSSPLLMYK RRRHNDTSSS  360
NCNASENSSG ATQDRSSSTT TAATTMSTMT TATRPPTTRN FLSALVEYSL LESIEPKENT  420
PVPPELDAAN LDSSLPPSCL KFIHDLQQEI HQVSIERDTL KFEMMSAQAM INILQSRIEI  480
LNKENSDLKR SSGGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.1	1e-120	NAC family protein