PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON98498.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family BES1
Protein Properties Length: 325aa    MW: 34848.8 Da    PI: 8.2132
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON98498.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822214.82.1e-6621451150
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 
                 ++++r ptwkErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g sa asp+ss++    
  PON98498.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPAERMDIVGGSAAASPCSSYH---- 96 
                 5899*******************************************************************************************.... PP

      DUF822 100 ssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                     +sp++sy++sp sssfpsp+s++ +++ +   +sl+p+l++ls++sss+
  PON98498.1  97 ----PSPCASYNPSPGSSSFPSPASSSYATNPNGdgHSLIPWLKNLSSASSSA 145
                 ....******************98877666554456**********9987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPAERM DIVGGSAAAS PCSSYHPSPC ASYNPSPGSS SFPSPASSSY  120
ATNPNGDGHS LIPWLKNLSS ASSSASSSKL PHLYIHGGSI SAPVTPPLSS PTARTPRIKT  180
YWEENSTRPA WGEQLCSFQP SSSTPPSPGR QAVDPEWFAG IRLPQGGPNS PTFSLVSANP  240
FGFKDEVMAG GGSRMWTPGQ SGTCSPAIAA GSDHTADIPM AEVISDEFAF GSHMTGLVKP  300
WEGERIHEEC GSDDLELTLG SSRTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-122BES1 family protein