PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON98355.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 391aa    MW: 43144.8 Da    PI: 4.5169
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON98355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA42.49.8e-14196232135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg ++  Tp +Rrgp g+++LCnaCGl+++ kg+
  PON98355.1 196 CQHCGISEncTPAMRRGPGGPRSLCNACGLMWANKGT 232
                 **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MDLVNPRPLQ ARPYIDEGDR VAQIPVQFEG DGVGFGSLNG GVGEARRDSS MAAARNSGLP  60
SRTSELTIAF EGEVYVFPAV TPEKVQAVLL LLGGCDVPSC VPSSEFLIEQ NSRGMSDPSR  120
SSKLSRRIAS LVRFREKRKD RCFEKKIRYS CRKEVAQRMH RKNGQFASSK EPCRLDVGNW  180
DSSDGTPGVE SVSRRCQHCG ISENCTPAMR RGPGGPRSLC NACGLMWANK GTLRDLTKSG  240
RANTSDQNET EILGDVKPLS VEPENFYHEQ DEQGSPEEIK PVSLDSELPS LRLSDQEMQD  300
VQEMQDMQGT AEVVTDHVSI QVENSSVEFD EQNGTSFWEG IIVSCVTYSR TCDSQETLDE  360
FTNTSGTEFD IPEHFDDQIS VFSSLTSSIG D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.27e-62GATA family protein