PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON98353.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family GATA
Protein Properties Length: 305aa    MW: 32647.9 Da    PI: 4.5012
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON98353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA54.81.3e-17219255135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C+nCgt++  Tp++Rrgp g++tLCnaCGl+++ kg+
  PON98353.1 219 CTNCGTSSesTPMMRRGPAGPRTLCNACGLKWANKGV 255
                 **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MPESNQEASM YGRGGAMANN NNMQSGGEDE DDDVTGAEES IDNPQIRFED GGCVAAMNSV  60
QDVPSNVLYL PSSDYPPVAE NGGSDQLTLS FQGEVYVFDA VSPEKVQAVL LLLGGYEIPS  120
VPAMGTNPVT QRGLNQFVSK PIQPQRAASL NRFREKRKER CFDKKIRYNV RKEVAMRMQR  180
KKGQFTSSKA SSDEVGSASS VWSGTQGSGQ DDGTQETSCT NCGTSSESTP MMRRGPAGPR  240
TLCNACGLKW ANKGVLRELK VPNGVQDASV KDTEQSDGDA NDSDAMTTTA NIVSSNGDPK  300
TTETG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.23e-73GATA family protein