PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON97992.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | DBB | ||||||||
Protein Properties | Length: 225aa MW: 24389.9 Da PI: 6.0151 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22 | 3.3e-07 | 15 | 45 | 5 | 36 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 C+ ++ +++ fC+ ++ +lC +C e+H g PON97992.1 15 SCESCQVAKATVFCRPDSAFLCLSCDAEIH-G 45 7*****999*********************.4 PP | |||||||
2 | zf-B_box | 22.6 | 2.1e-07 | 55 | 100 | 2 | 41 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41 +e++C +e+ ++ C+ + lC++C H + H +vp PON97992.1 55 REWMCVVCEQGPAAVVCNPDAAALCATCDADLH-SpgtrasrHVRVP 100 799*******99******************999.4467777777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence |
MESFQALWSA EIRKSCESCQ VAKATVFCRP DSAFLCLSCD AEIHGANKVA SRYHREWMCV 60 VCEQGPAAVV CNPDAAALCA TCDADLHSPG TRASRHVRVP VMPYLGWEPF SSSSIGPGHE 120 RGGGPNSGDS SGSELVEGSD FMSVDELSTY VDSFLVFDRD PSPSRVRQGS DHRSEPPPLV 180 STNQSWDNLS GNEFCGSFQH TTTTAQSLSQ HNQSHIFKRK KNGGT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24930.1 | 6e-27 | CO-like family protein |