PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97963.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 578aa MW: 64640.8 Da PI: 7.3424

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97963.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	130.5	1.3e-40	45	171	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppG+ F Ptdee++ yL+kkv++++++ + i++v++yk+ePwdL +k++ ++kewy+ ++r++ky++g+r+ ratksgy katg +++++ g PON97963.1 45 LPPGYVFIPTDEEII-GYLRKKVNNESMPR-NRIRDVELYKWEPWDLAekHKLHRSDKEWYYLTPRERKYKNGDRPARATKSGYYKATGIATDIYV-AG 140 79***********.9*******99.77**********84347777999**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 e+vg k++Lvfy g++pkg k+dWvm+ey+l PON97963.1 141 ENVGSKRSLVFYVGKSPKGDKSDWVMQEYKL 171 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MERHPSKQPE HIPSFVAENN GTDDLPATLS PSSDDDDDVS FFDNLPPGYV FIPTDEEIIG 60 YLRKKVNNES MPRNRIRDVE LYKWEPWDLA EKHKLHRSDK EWYYLTPRER KYKNGDRPAR 120 ATKSGYYKAT GIATDIYVAG ENVGSKRSLV FYVGKSPKGD KSDWVMQEYK LKYPEGTKGR 180 ERQGKDDMLL DEWVLCKLHK KLHPDKKRGR SQEESCPNKE DIHPKKTKGA KKRKIKRKSE 240 EAPVQPAEER LSRNQVESCH LMDEILSLTD QQEAHQQTNT HNVPIMNDFS QPMELFFPSD 300 QQLVQPNPSH FDSSTNDLIA VSELSSNTVH ATPINQYQAS LITSQHSNGG PKTESYPSEP 360 VQPNPSNVSS SAGSLWGHSG IVSNISTPAI RHQSSVSLNH LSNCGPQTQS YPSKSVQPDP 420 SHLLASTCSL DSHRGILSNR LHANPINHYG GPQTEPYPLP KYNFLDYNAS SSTSPIQEPI 480 QPNLSHFPFT GLSSNISHAT PIGPFPSSSI TTTANHLSSS NFSPMNNSGG SSLGERLDLP 540 LPQLAQHIQM VMSQQRTTAL PPPKGTFNHD HQHRIAGN

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MERHPSKQPE HIPSFVAENN GTDDLPATLS PSSDDDDDVS FFDNLPPGYV FIPTDEEIIG  60
YLRKKVNNES MPRNRIRDVE LYKWEPWDLA EKHKLHRSDK EWYYLTPRER KYKNGDRPAR  120
ATKSGYYKAT GIATDIYVAG ENVGSKRSLV FYVGKSPKGD KSDWVMQEYK LKYPEGTKGR  180
ERQGKDDMLL DEWVLCKLHK KLHPDKKRGR SQEESCPNKE DIHPKKTKGA KKRKIKRKSE  240
EAPVQPAEER LSRNQVESCH LMDEILSLTD QQEAHQQTNT HNVPIMNDFS QPMELFFPSD  300
QQLVQPNPSH FDSSTNDLIA VSELSSNTVH ATPINQYQAS LITSQHSNGG PKTESYPSEP  360
VQPNPSNVSS SAGSLWGHSG IVSNISTPAI RHQSSVSLNH LSNCGPQTQS YPSKSVQPDP  420
SHLLASTCSL DSHRGILSNR LHANPINHYG GPQTEPYPLP KYNFLDYNAS SSTSPIQEPI  480
QPNLSHFPFT GLSSNISHAT PIGPFPSSSI TTTANHLSSS NFSPMNNSGG SSLGERLDLP  540
LPQLAQHIQM VMSQQRTTAL PPPKGTFNHD HQHRIAGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	4e-44	NAC family protein