PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97867.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

GATA

Protein Properties

Length: 535aa MW: 59086.9 Da PI: 6.9824

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	50.9	2.2e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+t+TplWR+gp ++ LCnaCG ++r kg+ PON97867.1 7 CHHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MGKQGPCHHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDDFEDL 60 RISKVKSISL NKNKEVKLLK RKHNYDNVVV GGVATDYNQG FRKVIDEDAS NRSSSGSAIS 120 NSESCAQFGG GDASDLTGPA QSNVWDTSVP SRKRTCVNRP KQSSVEKLTK DLYSILQEQQ 180 SSYFSGSSEE DLLFESGTPM VSVEIGHGSV LIRHPTAIAR EEESEASSLS VDNKHSHSNE 240 AYSHSATHYD SKGVTFSGPG REKINFAGHG MQQEQFKREK SHQEIFQILG SHNSPLHHID 300 LIDALDSEEF MRHLTNEEQQ QLLKFLPSVD VVNLPDSLKS LFDSPQFREN ITSFQQLLAE 360 GVFDISFSGA KPEDCKTLKR LALSNLSKSK WVEHYHLLKN PKSSSRVSVI SASNITASSN 420 RRPQDSQNKK FPEVKIVMKS PKRMIVKASY DKKEVIDNDG SCFSPRSLFA LPPDGSSLLL 480 DSINFVEESS DQDLLLDVPS NGSFAQAELL HPALSFGSQQ ASTSSSSIYP HLVHP

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MGKQGPCHHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RAEPDDFEDL  60
RISKVKSISL NKNKEVKLLK RKHNYDNVVV GGVATDYNQG FRKVIDEDAS NRSSSGSAIS  120
NSESCAQFGG GDASDLTGPA QSNVWDTSVP SRKRTCVNRP KQSSVEKLTK DLYSILQEQQ  180
SSYFSGSSEE DLLFESGTPM VSVEIGHGSV LIRHPTAIAR EEESEASSLS VDNKHSHSNE  240
AYSHSATHYD SKGVTFSGPG REKINFAGHG MQQEQFKREK SHQEIFQILG SHNSPLHHID  300
LIDALDSEEF MRHLTNEEQQ QLLKFLPSVD VVNLPDSLKS LFDSPQFREN ITSFQQLLAE  360
GVFDISFSGA KPEDCKTLKR LALSNLSKSK WVEHYHLLKN PKSSSRVSVI SASNITASSN  420
RRPQDSQNKK FPEVKIVMKS PKRMIVKASY DKKEVIDNDG SCFSPRSLFA LPPDGSSLLL  480
DSINFVEESS DQDLLLDVPS NGSFAQAELL HPALSFGSQQ ASTSSSSIYP HLVHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-155	GATA family protein