PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON97838.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 181aa MW: 20378.1 Da PI: 9.4549 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57 | 3.3e-18 | 30 | 80 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++t+ q++ Le+ F +++++ae++ +LA+klgL rqV +W+qNrRa++k PON97838.1 30 RLTQAQVRLLETSFTTDHKLQAERKLQLAAKLGLAPRQVAIWYQNRRARHK 80 78***********************************************99 PP | |||||||
2 | HD-ZIP_I/II | 101.5 | 7.2e-33 | 29 | 118 | 4 | 93 |
HD-ZIP_I/II 4 rrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 rrl++ qv+lLE+sF++++kL+ erK +la +Lgl prqva+W+qnrRAR+kt+ +E dy+a++ +++ + +e+++Le+ev L++el++ PON97838.1 29 RRLTQAQVRLLETSFTTDHKLQAERKLQLAAKLGLAPRQVAIWYQNRRARHKTQTVELDYRAIQLKLEDVLAEKRSLEREVGMLKQELNK 118 8*************************************************************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MDFRCINIPT ERQQNQDPAK PSIQQRGIRR LTQAQVRLLE TSFTTDHKLQ AERKLQLAAK 60 LGLAPRQVAI WYQNRRARHK TQTVELDYRA IQLKLEDVLA EKRSLEREVG MLKQELNKAQ 120 EMLLRASGTG SSPVASLPSV ISASGVDDHG SSSSLQNYNY GSGNVAELQA EELYTCLSPW 180 T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18550.1 | 4e-27 | HD-ZIP family protein |