PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97837.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 287aa MW: 32286.3 Da PI: 8.4071

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97837.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	111.1	1.2e-34	55	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWka 85 lp+G++F+Ptd+el+ e+L+ kv++++++++ +i+ +i++++P++Lp v+++ +fF++ +k+y+tg+rk+r+++ + +W++ PON97837.1 55 LPAGVKFDPTDQELL-EHLEGKVRSETCKVHPlidefipTIEGEnGICYTHPQKLP-GVSKDGLVRHFFHRPSKAYTTGTRKRRKVHtdadggETRWHK 151 799**********.99*****5553344444433665557******.555666688**************744456555778* PP NAM 86 tgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 tgk+++v++ +g+ +g kk+Lv+y g+++k+ekt+Wvmh+y+l PON97837.1 152 TGKTRPVFV-GGRIKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 195 *******.99********6657999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 287 aa Download sequence
MTKCNVEERG VLDQTTINGD HIEGHKDHNL TRTCPSCGHH IKCQDQAGIH HLPGLPAGVK 60 FDPTDQELLE HLEGKVRSET CKVHPLIDEF IPTIEGENGI CYTHPQKLPG VSKDGLVRHF 120 FHRPSKAYTT GTRKRRKVHT DADGGETRWH KTGKTRPVFV GGRIKGYKKI LVLYTNYGKQ 180 RKPEKTNWVM HQYHLGNNEE EKEGELVVSK VFYQTQPRQC GSVMKDLLTN PAKNNNNSNL 240 IMKGQNDESF VEYSCNPNSF ISFEHGGQNG GTTPEMVTHF GAGSFVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-110	NAC family protein