PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97768.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 341aa    MW: 38961.3 Da    PI: 5.0494
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97768.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.83e-30148206259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D+++WrKYGqK++kgs++prsYYrC+s+ gC+++k+vers +dp+++++tY++eH h 
  PON97768.1 148 SDKWAWRKYGQKPIKGSPYPRSYYRCSSSkGCSARKQVERSPSDPEIFIVTYTSEHSHA 206
                 79*************************998****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MENWDLLAVV RGGVSNNTNN IGESRNMVAA ANIMMDPQTT SFFVNNPLSI QENDDDDHLA  60
LFHSFPHLFE TTTALDELEE LYKPFYPVDM VPPSPHLISS SPITVQINQE PQKKLIMIKK  120
EPAAPKYKKR KSQQKRVVKE VREDGLYSDK WAWRKYGQKP IKGSPYPRSY YRCSSSKGCS  180
ARKQVERSPS DPEIFIVTYT SEHSHAHPTR RNSLAGSTRS KFPVGTISKT QLEISNPDDH  240
SQDSEKDLVE KMSRDNNIEH EDILSNVMLG HNNELIFPTL EDLEKGLEEL DDDQSTNATA  300
FKPEFDYNIG FDLDYDFSDH HNFMDAWFNN DQYSTTVTGA C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.12e-29WRKY family protein