PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97342.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

MYB

Protein Properties

Length: 298aa MW: 33668.8 Da PI: 7.6586

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97342.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.6	4.9e-07	24	68	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 WT+eE +++ a + + +W ++a++++ g++ +++ + PON97342.1 24 EWTKEENKKFESALAIFDETtpnRWVKVAEMIP-GKSVFDVIKQYK 68 7***************99*********.*999887775 PP
2	Myb_DNA-binding	39.8	1.1e-12	122	166	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT++E+ +++ + ++G+g+W+ I+r + ++t+ q+ s+ qky PON97342.1 122 PWTKDEHTRFLLGLMKYGKGDWRNISRNFVVTKTPTQVASHAQKY 166 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
METLHPSSSL SSSSWLFQGS QSSEWTKEEN KKFESALAIF DETTPNRWVK VAEMIPGKSV 60 FDVIKQYKEL EEDVSDIEAG RFPIPGYLTS PFSFELVDDR DCFRKRPVSA RGSDHERKKG 120 VPWTKDEHTR FLLGLMKYGK GDWRNISRNF VVTKTPTQVA SHAQKYYLRQ HSGGKDKRRP 180 SIHDFTTFNL TETTTSENNI GPFLDQSSVI PPLQMSTEEA QKVLRNWNIP SDEEEALMVL 240 GSACGNLFMS SSPYDQIAPS GLKLPLGQNL FGGARYAAQT KPQASIFEVQ PSRYQARG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11280.1	5e-84	MYB family protein