PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97234.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

SBP

Protein Properties

Length: 511aa MW: 56568.4 Da PI: 7.4043

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97234.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	133.6	6.5e-42	169	244	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv+gC++dls+ k+yh++hkvC+vhsk+++v+v+g+eqrfCqqCsrfh lsefD++krsCrrrLa+hnerrrk++ PON97234.1 169 CQVHGCNMDLSSSKDYHKKHKVCDVHSKTSKVIVNGIEQRFCQQCSRFHLLSEFDDGKRSCRRRLAGHNERRRKPH 244 **************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MESWNFGPEG KNLLFSDEID WSDAFARSRK ALIQCENGFV PSRESMESLE SMELGLSDMF 60 RKTIQSSQGM EMLCGGEVGN GSINRAASPA CLISPNSSLV EDESGSKVSS SFMESNSQDS 120 PLIALKLGRL GDCRNSQSSE HSKERPVSSP SLAAKRARTR GSYSQTPFCQ VHGCNMDLSS 180 SKDYHKKHKV CDVHSKTSKV IVNGIEQRFC QQCSRFHLLS EFDDGKRSCR RRLAGHNERR 240 RKPHLDSLSD KPHKLSHSYQ GTRYLGTSLQ KRPPFVFSDI LPGVILSPEK YEQVNQFGHV 300 KFEEEPIYSP QLAVPVMSTQ LLSKSFIHPH GTGKQHASGI PSSETEDYCF HTAATIQKTS 360 GASNSARALS LLSAQSQNLS SHSAGIPNAC PLIIQGAHQT IGQLSEKPLR LRSMERHGPN 420 GFYSCGMNPM GVDQFESAMF SESNHAVAFE VPADRGFQDS NCLDTKYCLS PENGSTVDLL 480 QLSSHLQRVE HQRNFMPVKQ ENEDFCCFPT A

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MESWNFGPEG KNLLFSDEID WSDAFARSRK ALIQCENGFV PSRESMESLE SMELGLSDMF  60
RKTIQSSQGM EMLCGGEVGN GSINRAASPA CLISPNSSLV EDESGSKVSS SFMESNSQDS  120
PLIALKLGRL GDCRNSQSSE HSKERPVSSP SLAAKRARTR GSYSQTPFCQ VHGCNMDLSS  180
SKDYHKKHKV CDVHSKTSKV IVNGIEQRFC QQCSRFHLLS EFDDGKRSCR RRLAGHNERR  240
RKPHLDSLSD KPHKLSHSYQ GTRYLGTSLQ KRPPFVFSDI LPGVILSPEK YEQVNQFGHV  300
KFEEEPIYSP QLAVPVMSTQ LLSKSFIHPH GTGKQHASGI PSSETEDYCF HTAATIQKTS  360
GASNSARALS LLSAQSQNLS SHSAGIPNAC PLIIQGAHQT IGQLSEKPLR LRSMERHGPN  420
GFYSCGMNPM GVDQFESAMF SESNHAVAFE VPADRGFQDS NCLDTKYCLS PENGSTVDLL  480
QLSSHLQRVE HQRNFMPVKQ ENEDFCCFPT A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	8e-50	SBP family protein