PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON97178.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NAC | ||||||||
Protein Properties | Length: 218aa MW: 25319.8 Da PI: 9.4249 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 74.8 | 2.1e-23 | 15 | 132 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100 p+ frFh tdee++ +L k eg + +l+ i+evd + ++ +k ++kew f + d ky++++r++r+tk+g+Wk+tgk++e ++ v PON97178.1 15 PKWFRFHLTDEEII-THLMLKGEGMDSQLDPYIPEVDTATGTLHNY--LLKLDNKEWLFLYRPDYKYSNSNRSKRKTKTGFWKKTGKERETKD----CV 106 6779**********.78999999999999777****9776544333..2455889**********************************9988....8* PP NAM 101 glkktLvfykgrapkgektdWvmheyr 127 g k+ Lvf+kg++p + t Wv+hey PON97178.1 107 GRKRHLVFHKGSTPG-KGTGWVIHEYY 132 *********998886.89********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MSSSNAVMLS SDTMPKWFRF HLTDEEIITH LMLKGEGMDS QLDPYIPEVD TATGTLHNYL 60 LKLDNKEWLF LYRPDYKYSN SNRSKRKTKT GFWKKTGKER ETKDCVGRKR HLVFHKGSTP 120 GKGTGWVIHE YYYPQPHIDF RHQKPACVIC RLKYNARKKG RKADTPDSNV SSEASALTQE 180 VQCYDILSPQ SISQPSLVFF SIEETRRFLL NDETQAPF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 2e-16 | NAC family protein |