PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97175.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 310aa MW: 34994.1 Da PI: 6.1776

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.2	3e-31	13	135	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 ++G+rF Ptdee++ +yL+ k g++ e++ i++vdi +++Pw+Lp k k+k++++ew+f s+r ++++++ r+tk+g Wk+tgk+k+++ PON97175.1 13 AVGMRFCPTDEEVIGHYLRLKHLGRDSEVDAYIAQVDIRDWDPWELPcKsKLKSNDNEWWFSSRRCYVKSNSNHLVRKTKTGSWKSTGKEKTIKG---- 107 78*************************888**********96358888999********************************88.... PP NAM 99 lvglkktLvfykgrapkgektdWvmheyr 127 g k++L+f++ ++p+ + t Wv+hey PON97175.1 108 CNGRKRILTFHERSSPR-KGTGWVIHEYY 135 6799***888888.89******6 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MISNDASGGM PLAVGMRFCP TDEEVIGHYL RLKHLGRDSE VDAYIAQVDI RDWDPWELPC 60 KSKLKSNDNE WWFSSRRCYV KSNSNHLVRK TKTGSWKSTG KEKTIKGCNG RKRILTFHER 120 SSPRKGTGWV IHEYYYPALH GQKPTCVICR LKYDPHKKGR KADTRTPNSN ESEPSGEITS 180 DLERSVASAA IPEVQCYDKE DVQSISQPQS SPVSLFLETT RRVLLDDEMQ APPGADESNK 240 YYTELRSLLN VSPEENNCGA TTDNLFNTSS LSMGSYLEGP FSSEIDSLGD ELMPSIGYWN 300 PIANIGEYQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01550.1	4e-22	NAC family protein