PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97053.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Dof

Protein Properties

Length: 397aa MW: 41782 Da PI: 9.0681

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97053.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.8	3.2e-40	39	99	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvPvGgg+rknkk++ PON97053.1 39 PEQALKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKKVK 99 6899******************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MSADPTPAAP SSKSAAVKDE SHGGGSGNRK TSNAARPAPE QALKCPRCDS PNTKFCYYNN 60 YSLTQPRHFC KTCRRYWTKG GALRNVPVGG GCRKNKKVKS SSRLSGSCSG SGADSKDYSS 120 SSSTSDFGLK FFHGISPAMD FQLGGLSLIP PRLNLQHNPS SSAGIYSSNN HNNNSNINNQ 180 LSCFGDGVVS GSSNSFDTNN PSGTSNSLMG SFNYPLSLAP GGGFSGAGVH GNLASSIESL 240 SSINQDLHWK LQQQRLATML FAGESQKDGV VPSSQAVNPP LGNGHHQLAS AAVAQKPQSS 300 MTSVPLLFQN LEISRPDQPQ PLRKELAVIS SGDSTAAMDW FFGNSNYAPP LPLPHSHPVS 360 VTPSNSGSNG HENGSSTWNN NINHGVQAWG TDHFAAI

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MSADPTPAAP SSKSAAVKDE SHGGGSGNRK TSNAARPAPE QALKCPRCDS PNTKFCYYNN  60
YSLTQPRHFC KTCRRYWTKG GALRNVPVGG GCRKNKKVKS SSRLSGSCSG SGADSKDYSS  120
SSSTSDFGLK FFHGISPAMD FQLGGLSLIP PRLNLQHNPS SSAGIYSSNN HNNNSNINNQ  180
LSCFGDGVVS GSSNSFDTNN PSGTSNSLMG SFNYPLSLAP GGGFSGAGVH GNLASSIESL  240
SSINQDLHWK LQQQRLATML FAGESQKDGV VPSSQAVNPP LGNGHHQLAS AAVAQKPQSS  300
MTSVPLLFQN LEISRPDQPQ PLRKELAVIS SGDSTAAMDW FFGNSNYAPP LPLPHSHPVS  360
VTPSNSGSNG HENGSSTWNN NINHGVQAWG TDHFAAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65590.1	2e-51	Dof family protein