PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON97025.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 288aa    MW: 33086.5 Da    PI: 9.7445
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON97025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.55e-131982801497
                 T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
          B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                 ++ ++p +fa+++ ++  +s  +tle + g++  v   +y ++ ++  l kGW +F + n+L+egD++vF+l++++   l+v ++
  PON97025.1 198 KQSYVPADFARKYLQS--SSELITLEAPIGEQCIVSSnCYPRSHNSKRLDKGWCGFLRNNDLQEGDVCVFELISTKIIVLKVWIY 280
                 55699********544..5668********999999855677777788************************9877776666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MPPTRRNLQR RVGPSRGTLL RPTRISPPQF FKLMLRSTIL DQKLLLPEEF SIEFGEELST  60
LATLTVPNGC TWRVGVKKSH KDNMIWFLDG WHIEYPSVDE SSDEEDSDES DEIFDAKPFI  120
SNIGSSRNTR NCFSKRNIGR PSFGSPASGN SCEKNRSQRW RRLLCSKSSR HSKKRRFVKP  180
HEEKKAEGHP SRNNEQAKQS YVPADFARKY LQSSSELITL EAPIGEQCIV SSNCYPRSHN  240
SKRLDKGWCG FLRNNDLQEG DVCVFELIST KIIVLKVWIY RVADYAGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-15B3 family protein