PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON97020.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Protein Properties

Length: 429aa MW: 49741 Da PI: 9.8247

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON97020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.3	1.4e-13	326	408	13	92
TT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE....EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS B3 13 sgrlvlpkkfaeehggkkeesktltled.esgrsWevkliy..rkksgr.yvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 ++ + +p +f+++h+ k +s +++l+ + ++W v++ y ++ s++ +++GW F k+++L+ gD++vF+l+++ ++ l PON97020.1 326 NNYMDVPAEFVTRHM--KWCSEMIQLRVhNERKKWPVRCYYksKNVSCTvKKMGEGWGPFSKSKNLQGGDVCVFELISKvNGILL 408 57799*******8..568889999985677***775533333357788********************987555544 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MAEAEQSMPM KMLPLFALVM DESAIIEHKL RIPTKSAMIF HEELSELATL TVPNGHRPWH 60 VKLEKNGVNG IWLIDGLQEF INYYSIHSGC ILQFVYQRNS VFSVRICDPL GSEIDYPISG 120 PKFEEHNEKD RSNDDCRVEI FDSKQPMFRG SFCKQEGDAR DDYHLVENLN VKSPISHGSS 180 KRKALSGGLK QEYPGISTQI VLNQRERGKL RKRRRNAVSM DHRGPSDFWY RTRSISRIKE 240 EEEEAQELGN ANISGISKPK KNNNKSRPRD LPVKREGDHE MILPRSFSYD KSRRPVLSRE 300 TEKAVHAAFR CNLRNPSFMV IVKTYNNYMD VPAEFVTRHM KWCSEMIQLR VHNERKKWPV 360 RCYYKSKNVS CTVKKMGEGW GPFSKSKNLQ GGDVCVFELI SKVNGILLRV WIYHASDYEE 420 APRKRLKAK

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MAEAEQSMPM KMLPLFALVM DESAIIEHKL RIPTKSAMIF HEELSELATL TVPNGHRPWH  60
VKLEKNGVNG IWLIDGLQEF INYYSIHSGC ILQFVYQRNS VFSVRICDPL GSEIDYPISG  120
PKFEEHNEKD RSNDDCRVEI FDSKQPMFRG SFCKQEGDAR DDYHLVENLN VKSPISHGSS  180
KRKALSGGLK QEYPGISTQI VLNQRERGKL RKRRRNAVSM DHRGPSDFWY RTRSISRIKE  240
EEEEAQELGN ANISGISKPK KNNNKSRPRD LPVKREGDHE MILPRSFSYD KSRRPVLSRE  300
TEKAVHAAFR CNLRNPSFMV IVKTYNNYMD VPAEFVTRHM KWCSEMIQLR VHNERKKWPV  360
RCYYKSKNVS CTVKKMGEGW GPFSKSKNLQ GGDVCVFELI SKVNGILLRV WIYHASDYEE  420
APRKRLKAK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	211	215	RKRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	2e-19	B3 family protein