PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96621.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HB-other

Protein Properties

Length: 999aa MW: 110889 Da PI: 9.619

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19	2.4e-06	69	125	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ ++ ++++F + ++s++e +e+++ g+t +qV+ +F +R++ ++ PON96621.1 69 KRPRDLLNPKAVKYMQSVFSIKDTVSKKESREISALYGVTVTQVREFFASQRTRVRR 125 799***************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 999 aa Download sequence
MKILKEESLE LQIGSSAESL HKSLDSQREL FHSQIDQLQR IVVTQCKLTG ANPLSQEMAA 60 GALSVKIGKR PRDLLNPKAV KYMQSVFSIK DTVSKKESRE ISALYGVTVT QVREFFASQR 120 TRVRRLVRLS REKSTRTIQC RELPDGVPTS SDTLLPIDPV PLNTIGPTTV EETPSCSTND 180 YVLAGIDDLD KQFVENIFGL MRKEETFTGQ VKLMEWILRI QNSAVLSWFL GKGGMMILAT 240 WLSQAAIEEQ TSVLLVVLNV LCHLPLHKAL PVHMSAILQS VNRLRFYRTS DISNRARVLL 300 SKWSKLLARS QAMKKPNGVK SSSNVQQHLS EVIGDDSWQS SVDTSENILE IPENIRKSEP 360 IQSLKLLPAS SDDSNKKNIL GLSSSQFRER RKVQLVEQPG QRAAGRSPQA TRAAPLNQGR 420 PMSADDIQKA KMRAQFMQSK YGRANSSNEN KEVKTEGLNK PSTSQVSTLS TASKVLVRHN 480 LEEHKKPTTP PLKVPNTTEA SLGSKPIIDL EESLWEKCRR VQISWQTPPE VKLNNQWRVG 540 AGENSKEVDF QKNRNRREKE TIYQLLQEIP LNPKEPWDRE MDYDDTLTLE IPTEQLPDAD 600 GGGGAAETQV APNHGVNNAV AQDAASQRAN GSVLLAPVTS QSGNASTAEP DLELLAVLLK 660 NPELVFALTS GQAANLSSEE TVKLLDMIKA GNTSSNNVLN RQVEEKVEVS LPSPTPSSNP 720 GTSGWRPEAA RNPFSRVPLP NRLADNPPAV AATRSVLPTQ MSAAHVAPPY SLPQVTSMVP 780 EKYTSLGSSL HQIPLTSPST VQTDLPPATG PLYNLHAQAA SSLRLETATN IKPPAPMSNN 840 AFNIEERRHV SFSPTPLPVP SQLQMHQHLL HQQQQFFSEP SLSTPAYSKQ IGKPSHEPDS 900 WRPRQCLPSS NYNPLLNQNN GYNHASFGGS DYVEEDEFES WSPNNSPSRN PEYGSGRSFA 960 EPRMNAGRGY RPDQSRVRSS PGYRDHNRHG NRRWRDRRR

Sequence ? help Back to Top

Protein Sequence Length: 999 aa Download sequence

MKILKEESLE LQIGSSAESL HKSLDSQREL FHSQIDQLQR IVVTQCKLTG ANPLSQEMAA  60
GALSVKIGKR PRDLLNPKAV KYMQSVFSIK DTVSKKESRE ISALYGVTVT QVREFFASQR  120
TRVRRLVRLS REKSTRTIQC RELPDGVPTS SDTLLPIDPV PLNTIGPTTV EETPSCSTND  180
YVLAGIDDLD KQFVENIFGL MRKEETFTGQ VKLMEWILRI QNSAVLSWFL GKGGMMILAT  240
WLSQAAIEEQ TSVLLVVLNV LCHLPLHKAL PVHMSAILQS VNRLRFYRTS DISNRARVLL  300
SKWSKLLARS QAMKKPNGVK SSSNVQQHLS EVIGDDSWQS SVDTSENILE IPENIRKSEP  360
IQSLKLLPAS SDDSNKKNIL GLSSSQFRER RKVQLVEQPG QRAAGRSPQA TRAAPLNQGR  420
PMSADDIQKA KMRAQFMQSK YGRANSSNEN KEVKTEGLNK PSTSQVSTLS TASKVLVRHN  480
LEEHKKPTTP PLKVPNTTEA SLGSKPIIDL EESLWEKCRR VQISWQTPPE VKLNNQWRVG  540
AGENSKEVDF QKNRNRREKE TIYQLLQEIP LNPKEPWDRE MDYDDTLTLE IPTEQLPDAD  600
GGGGAAETQV APNHGVNNAV AQDAASQRAN GSVLLAPVTS QSGNASTAEP DLELLAVLLK  660
NPELVFALTS GQAANLSSEE TVKLLDMIKA GNTSSNNVLN RQVEEKVEVS LPSPTPSSNP  720
GTSGWRPEAA RNPFSRVPLP NRLADNPPAV AATRSVLPTQ MSAAHVAPPY SLPQVTSMVP  780
EKYTSLGSSL HQIPLTSPST VQTDLPPATG PLYNLHAQAA SSLRLETATN IKPPAPMSNN  840
AFNIEERRHV SFSPTPLPVP SQLQMHQHLL HQQQQFFSEP SLSTPAYSKQ IGKPSHEPDS  900
WRPRQCLPSS NYNPLLNQNN GYNHASFGGS DYVEEDEFES WSPNNSPSRN PEYGSGRSFA  960
EPRMNAGRGY RPDQSRVRSS PGYRDHNRHG NRRWRDRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	0.0	HB-other family protein