PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96378.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Dof

Protein Properties

Length: 509aa MW: 54800.3 Da PI: 4.9979

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96378.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.5	3.9e-40	146	206	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprCds++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s PON96378.1 146 PDKILPCPRCDSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSA 206 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MSEAKDPAIK LFGKTIPVAE VPVSSGGGSP RASASGSACA TSIDDNMDQD RASFANSSSE 60 VNTNKDEEDG EPDKETTKEK PIETKEEDGS QPLSSEEPRN SDATSGISEN PTTPSVDKES 120 ATLTASKAEE EQSEASNSQE KTLKKPDKIL PCPRCDSMDT KFCYYNNYNV NQPRHFCKNC 180 QRYWTAGGTM RNVPVGAGRR KNKNSASHYR HITVSEALQN ARTDVPTGIR SPHPSLKSNG 240 TVLTFGSDTP LCESMASVLN LADKTMRNCT QNGFRKPEEL KIPVPCGGGE NGDNNVDGSS 300 VTASNSKDET CKSGSQEQVI QNCQGFPPQV PCFPGAPWPY PWNSAQWSSP VAVPAFCPPG 360 FPMPFYPAAA YWGCSVPGAW NIPWLPQPSS PNTAAPSSGP NSPTLGKHSR DENTLKTDSS 420 LEEEPPKESN SERCIWIPKT LRIDDPGEAA RSSIWATLGI KNDKADSISG GLFKAFQPKN 480 DEKNHTAENS VLQANPAALS RSLSFQESS

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MSEAKDPAIK LFGKTIPVAE VPVSSGGGSP RASASGSACA TSIDDNMDQD RASFANSSSE  60
VNTNKDEEDG EPDKETTKEK PIETKEEDGS QPLSSEEPRN SDATSGISEN PTTPSVDKES  120
ATLTASKAEE EQSEASNSQE KTLKKPDKIL PCPRCDSMDT KFCYYNNYNV NQPRHFCKNC  180
QRYWTAGGTM RNVPVGAGRR KNKNSASHYR HITVSEALQN ARTDVPTGIR SPHPSLKSNG  240
TVLTFGSDTP LCESMASVLN LADKTMRNCT QNGFRKPEEL KIPVPCGGGE NGDNNVDGSS  300
VTASNSKDET CKSGSQEQVI QNCQGFPPQV PCFPGAPWPY PWNSAQWSSP VAVPAFCPPG  360
FPMPFYPAAA YWGCSVPGAW NIPWLPQPSS PNTAAPSSGP NSPTLGKHSR DENTLKTDSS  420
LEEEPPKESN SERCIWIPKT LRIDDPGEAA RSSIWATLGI KNDKADSISG GLFKAFQPKN  480
DEKNHTAENS VLQANPAALS RSLSFQESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-112	Dof family protein