PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON96013.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 363aa MW: 40705.4 Da PI: 4.5476

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON96013.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.1	8.1e-35	41	132	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k++e++ed++++ ++sws+ nsfvv+d+++f++ +Lp+yFkh nf+SF+RQLn+YgF+kv+ ++ weF+++ F g+k+ll++ik PON96013.1 41 FLTKTFEMVEDPSTDAIVSWSRARNSFVVWDSHKFSTLLLPRYFKHGNFSSFIRQLNTYGFRKVDPDR---------WEFANEGFLGGQKHLLKTIK 128 9**************************************************************999.........****************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+++ PON96013.1 129 RRRN 132 *987 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MEGVIVKEEE VTYRAGSSSS SSSNASPQPM EGLHDVGPPP FLTKTFEMVE DPSTDAIVSW 60 SRARNSFVVW DSHKFSTLLL PRYFKHGNFS SFIRQLNTYG FRKVDPDRWE FANEGFLGGQ 120 KHLLKTIKRR RNVSQSFQQQ LGTCIELGQF GVETELERLK RDRNVLMAEI VKLRQQQQDS 180 RDRVTAMEDR LLLTERKQQQ MMSFLAKALN NPTFVQQFIR RNAQRTQLRG GGRKRRLAAT 240 SAETSGEEIP AIGAVEQGLE ELAAVDSEIE SLFSAALEDE SSSGVKDPAA SSSGGVNLDC 300 VNETIWEELL SDDLISGNPE EEVVVGDESE LHVEVEDLAS NPDDWGEDLL DLVDQMGYLR 360 SKP

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MEGVIVKEEE VTYRAGSSSS SSSNASPQPM EGLHDVGPPP FLTKTFEMVE DPSTDAIVSW  60
SRARNSFVVW DSHKFSTLLL PRYFKHGNFS SFIRQLNTYG FRKVDPDRWE FANEGFLGGQ  120
KHLLKTIKRR RNVSQSFQQQ LGTCIELGQF GVETELERLK RDRNVLMAEI VKLRQQQQDS  180
RDRVTAMEDR LLLTERKQQQ MMSFLAKALN NPTFVQQFIR RNAQRTQLRG GGRKRRLAAT  240
SAETSGEEIP AIGAVEQGLE ELAAVDSEIE SLFSAALEDE SSSGVKDPAA SSSGGVNLDC  300
VNETIWEELL SDDLISGNPE EEVVVGDESE LHVEVEDLAS NPDDWGEDLL DLVDQMGYLR  360
SKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	130	LKTIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-120	HSF family protein