PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95959.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Nin-like

Protein Properties

Length: 417aa MW: 47518.5 Da PI: 4.5215

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	76.8	2.4e-24	322	372	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +++l dl++y +l+i+dAAk ++vc+TvLK+iCR+++++RWP+Rki+s+ PON95959.1 322 TGKLTLMDLREYLHLTIEDAAKAMNVCPTVLKKICRRHNLPRWPYRKIRSI 372 5689*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MADPGAIMSY YDLYDGPFSE NLSNILTDYE NPSLLDLPEP DHIGGQGPSN TSDNHNPDHV 60 TLEQNSATNW DLPIDFNVDQ CLGSGPNNQP GPSRIRDHQE TNNNDPDDQV IEENLEFPQV 120 NNSNNIGGNS RTLPTWPSPP VPFNCTCCQV LREIIHVNEF NNYMKLEIHG RLGMICHAIW 180 ESRNTTNNNV TTSTSSGNDP RFEMFDFCRQ SIEDVKRFLV EYCSRRKVEG YVMLHDPLSI 240 FYEALCVGLE WDELSNNDFD FVPTSPPHNS GGAEENYTEQ QGQEEQQVTH QQEQTVETRL 300 ETTQNDVERN SRISLAEQRQ RTGKLTLMDL REYLHLTIED AAKAMNVCPT VLKKICRRHN 360 LPRWPYRKIR SIKRQISSLR PNLESNDAAV REQAQAEIDR LRQEATNICA GVDVVGL

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MADPGAIMSY YDLYDGPFSE NLSNILTDYE NPSLLDLPEP DHIGGQGPSN TSDNHNPDHV  60
TLEQNSATNW DLPIDFNVDQ CLGSGPNNQP GPSRIRDHQE TNNNDPDDQV IEENLEFPQV  120
NNSNNIGGNS RTLPTWPSPP VPFNCTCCQV LREIIHVNEF NNYMKLEIHG RLGMICHAIW  180
ESRNTTNNNV TTSTSSGNDP RFEMFDFCRQ SIEDVKRFLV EYCSRRKVEG YVMLHDPLSI  240
FYEALCVGLE WDELSNNDFD FVPTSPPHNS GGAEENYTEQ QGQEEQQVTH QQEQTVETRL  300
ETTQNDVERN SRISLAEQRQ RTGKLTLMDL REYLHLTIED AAKAMNVCPT VLKKICRRHN  360
LPRWPYRKIR SIKRQISSLR PNLESNDAAV REQAQAEIDR LRQEATNICA GVDVVGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	1e-13	Nin-like family protein