PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON95400.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

SBP

Protein Properties

Length: 393aa MW: 44442.1 Da PI: 8.2014

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON95400.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.7	4.4e-40	105	181	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adls+++eyh+rh+vCe hsk+pvv+v+g+e+rfCqqCsrfh+l efDe krsCr+rL++hn+rrrk+q+ PON95400.1 105 CLVDGCRADLSSCREYHKRHRVCERHSKTPVVTVKGEEKRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKSQP 181 **************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MYRKGVDQIE ELDGALMDWD LKEFGWDSAE LDPKEDDDDT VLLDFISTQK STTAPSSEGL 60 KLGSIMADPT ERSLKRSNDI VLASNLVSSP SGSSKRLNGA QKLSCLVDGC RADLSSCREY 120 HKRHRVCERH SKTPVVTVKG EEKRFCQQCS RFHSLGEFDE VKRSCRKRLD GHNRRRRKSQ 180 PEPLYFSSKS FLSGYKGPRI LHFGSPQIYA ATSVRSLWPL ETKTGATESW IYSPHKRFQV 240 TNQQSPPTSF NGGDKRLFFL QKNDLKQGNQ AYPETFLCHP FEPPGKGRQR ENRIMSSEEI 300 SLPIDSGGRA LYLLSTNPTQ FSGLNQLGQS NESFPYPFQL LDYNIGKDKT VDPNLPVYDV 360 NKTNIYGNMM LRMGPDDLLE HGAALQMLPI SLE

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MYRKGVDQIE ELDGALMDWD LKEFGWDSAE LDPKEDDDDT VLLDFISTQK STTAPSSEGL  60
KLGSIMADPT ERSLKRSNDI VLASNLVSSP SGSSKRLNGA QKLSCLVDGC RADLSSCREY  120
HKRHRVCERH SKTPVVTVKG EEKRFCQQCS RFHSLGEFDE VKRSCRKRLD GHNRRRRKSQ  180
PEPLYFSSKS FLSGYKGPRI LHFGSPQIYA ATSVRSLWPL ETKTGATESW IYSPHKRFQV  240
TNQQSPPTSF NGGDKRLFFL QKNDLKQGNQ AYPETFLCHP FEPPGKGRQR ENRIMSSEEI  300
SLPIDSGGRA LYLLSTNPTQ FSGLNQLGQS NESFPYPFQL LDYNIGKDKT VDPNLPVYDV  360
NKTNIYGNMM LRMGPDDLLE HGAALQMLPI SLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	1e-45	SBP family protein