PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON95148.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | Whirly | ||||||||
Protein Properties | Length: 235aa MW: 25573.4 Da PI: 10.1081 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 188.2 | 1.4e-58 | 61 | 196 | 2 | 137 |
Whirly 2 vyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlp 100 v+k+kaal+v +++ptf++ldsg +++r+G ++l++++a++erkydWekkq fals+tev++l++l++ +sceffhdp++ +sn+G+vrk+l+++P++ PON95148.1 61 VFKGKAALSVTPILPTFTKLDSGLHVVERRGVMMLKFIPAIGERKYDWEKKQLFALSPTEVGSLISLGASDSCEFFHDPSMLSSNAGQVRKSLSIKPHS 159 9************************************************************************************************** PP Whirly 101 dGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 GsG++++l+v n++ k+ +++svP + aefav++++ PON95148.1 160 TGSGYMISLTVVNNVEKSRDNLSVPFTTAEFAVVKTA 196 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MTTKLSRLLA SSRNHLSKNI LCGKDGNLSD GLPLHTFTSR AGISTAGQNL GIKGIAAPYT 60 VFKGKAALSV TPILPTFTKL DSGLHVVERR GVMMLKFIPA IGERKYDWEK KQLFALSPTE 120 VGSLISLGAS DSCEFFHDPS MLSSNAGQVR KSLSIKPHST GSGYMISLTV VNNVEKSRDN 180 LSVPFTTAEF AVVKTACSYA LPHILGWDRL TDKVARGHAS NFKSDRQLMD SEWDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 1e-87 | Whirly family protein |