PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON95037.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family WRKY
Protein Properties Length: 352aa    MW: 39346.6 Da    PI: 10.3238
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON95037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.3e-31286343359
                 -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ ed +++++tYegeHnh+
  PON95037.1 286 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEDSSMLIVTYEGEHNHP 343
                 99***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MEEVEEANKA AVESCHRVLS LLSQPQDQVQ RRNLVVETGE AVFRFKRVVS LLNTGLGHAR  60
VRKLKKLPIP LPQSILLDNP NCRTDRPSKS SPFLQSSFLE NPLQDMGSNV KSSLCLGNPS  120
LELSSSGKTP IQLAQQATPA AHYRLLQHQQ QQQQQQQQQQ KLLFQQQMKH QAEMMFRKSN  180
SGISLNFDSS SCTPTMSTSN RSFISSLSMD GSVANLDGNA FHLIGAPRSS DQNSQHKRKC  240
SVRGDDGSVK CGSSGRCHCS KKRKHRVKRS IKVPAISNKL ADIPPDDYSW RKYGQKPIKG  300
SPHPRGYYKC SSMRGCPARK HVERCLEDSS MLIVTYEGEH NHPRIQSQSA NT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-123WRKY family protein