PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON94619.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NAC
Protein Properties Length: 271aa    MW: 30729.9 Da    PI: 8.3287
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON94619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM131.75.1e-41211017128
         NAM  17 eyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapk 115
                 +yL++k++++++ +  +i+e+d+yk++PwdLp ++  +ekewyfFs+r++ky++g+r+nra+ +gyWkatg dk++ +   + vg+kk Lvfy g+ap+
  PON94619.1   2 HYLCRKCASQPIAV-PIIAEIDLYKYDPWDLPGMALYGEKEWYFFSPRERKYPNGSRPNRAAGTGYWKATGADKPIGH--PKPVGIKKALVFYAGKAPR 97 
                 8***********99.88***************6666689*************************************99..789**************** PP

         NAM 116 gektdWvmheyrl 128
                 gekt+W+mheyrl
  PON94619.1  98 GEKTNWIMHEYRL 110
                 ***********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MHYLCRKCAS QPIAVPIIAE IDLYKYDPWD LPGMALYGEK EWYFFSPRER KYPNGSRPNR  60
AAGTGYWKAT GADKPIGHPK PVGIKKALVF YAGKAPRGEK TNWIMHEYRL ADVDRSARKK  120
NSLRLDDWVL CRIYNKKGTI ERQHQGSNRK TSYPELEDKK PEILNTCPPP PSAAAAAAPP  180
ASGVTDFLYF ETSESIPRLH TDSSCSEHVV SPEFTCEVQS EPKWKEWEKA LDFPYNYVDA  240
TVDNGGFASQ LPGGNQMSPL QDMFMYLPKP F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-133NAC family protein