PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON94505.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 722aa MW: 79944.7 Da PI: 7.9393

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON94505.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.4	1.6e-54	4	130	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+++yL++kv++++++ ++++ vd++k+ePwdLp k++ +ekewyfFs +d+ky+tg r+nrat++gyWk+tgkdke+++ + l PON94505.1 4 LPPGFRFHPTDEELITYYLARKVSDSSFTS-KAVAVVDLNKCEPWDLPDKASMGEKEWYFFSLKDRKYPTGLRTNRATEAGYWKTTGKDKEIFR-ASVL 100 79***********************999.88***********988999*************************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+kktLvfykgrap+gek++Wvmheyrle PON94505.1 101 VGMKKTLVFYKGRAPRGEKSNWVMHEYRLE 130 ****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 722 aa Download sequence
MEELPPGFRF HPTDEELITY YLARKVSDSS FTSKAVAVVD LNKCEPWDLP DKASMGEKEW 60 YFFSLKDRKY PTGLRTNRAT EAGYWKTTGK DKEIFRASVL VGMKKTLVFY KGRAPRGEKS 120 NWVMHEYRLE NKYPFKQSKE EWVVCRVFQK STGLKKPQQT PSSHEPSIES PGDDTNSIVN 180 NEFGDIELPN LNTIANSSGC FGNNNISTQL GFMNSSNTNN NKINNHLSNM MSLNNMNYWT 240 GTTAHSASST LIPSLSSWPS NMLSPNLSMN SFLLKALQLR NSGTTIDNYS YMPQGISQFS 300 TTDILSTATS NNFQLPSSSS PKMNNNNNIV VDSTSQVQAQ QEQPFNLDSI GEDHDLTLIE 360 QNQQQARQIL IQNPLLTKAL FQAQIMLGMV QPPQVIPNIE QPPPQHSQQS IQLTQQSNNQ 420 ATQSLSGQVG VKDQAGASQM QTPARMQHQN QPAMATSSAA VPAVHIQPQP TPLHPLQTPQ 480 QPRGHLHPQV AATSHSQSSQ LPNLPTLPLH SSSQPPPLHP SHIHTHSTQL QQPLQTTGIP 540 HLPLQPPLPP QPRPHSLGNF QHQYPSQMGS NVSFQHAGPP QHLSQPMFHP GTKPPANIGP 600 SFSHPQHQLP SQPPPQSVYQ VGNMPLGTEF NNQVTSSMQV DRGSAWMSAP PENSALTQLS 660 APPSLVPGQM GPGNQHPRPQ SLSPEMEKAL LQQVMSLTPD QINLLPPEQR NQVLQLQQIL 720 RQ

Sequence ? help Back to Top

Protein Sequence Length: 722 aa Download sequence

MEELPPGFRF HPTDEELITY YLARKVSDSS FTSKAVAVVD LNKCEPWDLP DKASMGEKEW  60
YFFSLKDRKY PTGLRTNRAT EAGYWKTTGK DKEIFRASVL VGMKKTLVFY KGRAPRGEKS  120
NWVMHEYRLE NKYPFKQSKE EWVVCRVFQK STGLKKPQQT PSSHEPSIES PGDDTNSIVN  180
NEFGDIELPN LNTIANSSGC FGNNNISTQL GFMNSSNTNN NKINNHLSNM MSLNNMNYWT  240
GTTAHSASST LIPSLSSWPS NMLSPNLSMN SFLLKALQLR NSGTTIDNYS YMPQGISQFS  300
TTDILSTATS NNFQLPSSSS PKMNNNNNIV VDSTSQVQAQ QEQPFNLDSI GEDHDLTLIE  360
QNQQQARQIL IQNPLLTKAL FQAQIMLGMV QPPQVIPNIE QPPPQHSQQS IQLTQQSNNQ  420
ATQSLSGQVG VKDQAGASQM QTPARMQHQN QPAMATSSAA VPAVHIQPQP TPLHPLQTPQ  480
QPRGHLHPQV AATSHSQSSQ LPNLPTLPLH SSSQPPPLHP SHIHTHSTQL QQPLQTTGIP  540
HLPLQPPLPP QPRPHSLGNF QHQYPSQMGS NVSFQHAGPP QHLSQPMFHP GTKPPANIGP  600
SFSHPQHQLP SQPPPQSVYQ VGNMPLGTEF NNQVTSSMQV DRGSAWMSAP PENSALTQLS  660
APPSLVPGQM GPGNQHPRPQ SLSPEMEKAL LQQVMSLTPD QINLLPPEQR NQVLQLQQIL  720
RQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18400.1	1e-100	NAC family protein