PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON94213.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 388aa    MW: 41521.5 Da    PI: 5.4066
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON94213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH49.67.3e-16194240455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  hn  E+rRR+riN+++  L+ l+P++      K +Ka++L +A+eY+k+Lq
  PON94213.1 194 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 240
                 6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MEDLYGTAPS SGNNGLASES EEINNILNQL LHSSSSSSPY SSSSSSSSSC MTCKTKYTHL  60
LHSQPPPTSF SDTVSGSGLF GSEAPQEDRI GFGRSANRSE LDHRVVDGSS GAGSSSGFNF  120
SDTGGYFGAE VKDGAENTFF SAGLADSDAK GRRVSPENDF GDFSCDSEGA EGSEMRTNSA  180
PPRSSSKRSR AAEVHNLSEK RRRSRINEKM KALQNLIPNS NKTDKASMLD EAIEYLKQLQ  240
LQVQMLSMRN GLSLHPMCLP GVLQPMQLPL PQTGLGYNEG PKYLNSNRGI STFSGVEESL  300
MHSAYNLSNT STISNQPTTI PSFANIATTP EASLGFEQSI HTHFRPISLP TSSKDLCNDG  360
KSQLQVDTCH TGKSSSEVGI LSSENPEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.11e-41bHLH family protein