PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93666.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 692aa MW: 74417.5 Da PI: 7.219

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.9	2.8e-30	304	363	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+a+d +++++tYeg+Hnh+ PON93666.1 304 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApSCPVRKQVQRCADDMSILITTYEGTHNHP 363 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MEAAALGKAG PGGFVVKEEI KRVESSGDDD QEAAGCKEDF ALKIGNERVP HDETDDTKRS 60 SPKQKDLSCN KQQVSRTTDH IESSSIEPDS IASSSRRKEQ KNDQLESTRA EMGEVREENQ 120 RLKIYLSQIM KDYQTLQMQF NNIVKQETAK KSTDNSTHNS NNNQNEIEET DLVSLSLGSF 180 GSGNPKINNY KDEKNKIPSN MITRTKENME QPIDHEDQGL SLGLEYKYEG SKSVTETDQG 240 GPAVSNPSAA SSFEEPNKEE AGETWPPSKV LKTVKRSVED EVSQQNPVKK ARVCVRARCD 300 TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK QVQRCADDMS ILITTYEGTH 360 NHPLPVSATA MASTTSAAAS MLLSGSSSSS RPGGIPSPSA ATATAELHRF NTLDSSKWNK 420 QTFYLPSSSA SYSSFSSSHP TITLDLTSSN SSHLLNKFSS SSSSSPNYPH DQHHNHHPMY 480 PSTSLSFGSS NSDQYSNSNN LSWINNGFLS YGTSQVPYNT RNQIGTLALG KHTTASTTTS 540 THNYMQKNSP ITPPDHHSST IAAATKAITA DPAFQSALAA ALTSIIGGAS GGGGGGGSGG 600 DTNNNDVVHK LKWGTGGTSS SDHHLQTAPK GINGCASTFL NKTALTLNNS QPPTPGNNLM 660 FLSPNSLSFS ASKSTTTASA SPSSDHTREQ TS

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MEAAALGKAG PGGFVVKEEI KRVESSGDDD QEAAGCKEDF ALKIGNERVP HDETDDTKRS  60
SPKQKDLSCN KQQVSRTTDH IESSSIEPDS IASSSRRKEQ KNDQLESTRA EMGEVREENQ  120
RLKIYLSQIM KDYQTLQMQF NNIVKQETAK KSTDNSTHNS NNNQNEIEET DLVSLSLGSF  180
GSGNPKINNY KDEKNKIPSN MITRTKENME QPIDHEDQGL SLGLEYKYEG SKSVTETDQG  240
GPAVSNPSAA SSFEEPNKEE AGETWPPSKV LKTVKRSVED EVSQQNPVKK ARVCVRARCD  300
TPTMNDGCQW RKYGQKIAKG NPCPRAYYRC TVAPSCPVRK QVQRCADDMS ILITTYEGTH  360
NHPLPVSATA MASTTSAAAS MLLSGSSSSS RPGGIPSPSA ATATAELHRF NTLDSSKWNK  420
QTFYLPSSSA SYSSFSSSHP TITLDLTSSN SSHLLNKFSS SSSSSPNYPH DQHHNHHPMY  480
PSTSLSFGSS NSDQYSNSNN LSWINNGFLS YGTSQVPYNT RNQIGTLALG KHTTASTTTS  540
THNYMQKNSP ITPPDHHSST IAAATKAITA DPAFQSALAA ALTSIIGGAS GGGGGGGSGG  600
DTNNNDVVHK LKWGTGGTSS SDHHLQTAPK GINGCASTFL NKTALTLNNS QPPTPGNNLM  660
FLSPNSLSFS ASKSTTTASA SPSSDHTREQ TS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	5e-65	WRKY family protein