PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93575.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Dof

Protein Properties

Length: 478aa MW: 52075.8 Da PI: 6.5106

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93575.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	9.7e-40	128	188	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCkaC+ryWt+GG++rnvPvG+grrknk+s PON93575.1 128 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKNSA 188 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MLESKDPAIK LFGKKIPLPA DDEAPALSGD ELASQPSERD VDEEEEEAEP EKDSSPRTVS 60 DESIEQDGDP SLETEYSRNL ESLPEFSSVN PKTPSINEES SKSKMAKTDK EQSDATNINS 120 QEKTLKKPDK ILPCPRCNSM DTKFCYYNNY NVNQPRHFCK ACQRYWTAGG TMRNVPVGAG 180 RRKNKNSASH YRHITISEAL QAARIDAHPN GTTHHPSLKT NGRVLSFGVD APICDSMASV 240 LNLSDKKVLN GNRNGFHKIE GRENNGDDCS SVSSVTVSNS MDEVGRNCSQ EPQMQSINGH 300 GFSSVPCIPG VPWPYPWNSG VPPPAFCPPG FPMSFYPAAY WNCAVPGAWN IPWFPQQPSS 360 PSQKSPSSGS GSSSPTLGKH SRDGDTLRPE NLEKEESPKR KNGCVLVPKT LRIDDPSEAA 420 KSSIWATLGI KNDSISGGGM FKAFQSKSGD KKSIAETSPV LRANPAALSR SLNFHESS

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MLESKDPAIK LFGKKIPLPA DDEAPALSGD ELASQPSERD VDEEEEEAEP EKDSSPRTVS  60
DESIEQDGDP SLETEYSRNL ESLPEFSSVN PKTPSINEES SKSKMAKTDK EQSDATNINS  120
QEKTLKKPDK ILPCPRCNSM DTKFCYYNNY NVNQPRHFCK ACQRYWTAGG TMRNVPVGAG  180
RRKNKNSASH YRHITISEAL QAARIDAHPN GTTHHPSLKT NGRVLSFGVD APICDSMASV  240
LNLSDKKVLN GNRNGFHKIE GRENNGDDCS SVSSVTVSNS MDEVGRNCSQ EPQMQSINGH  300
GFSSVPCIPG VPWPYPWNSG VPPPAFCPPG FPMSFYPAAY WNCAVPGAWN IPWFPQQPSS  360
PSQKSPSSGS GSSSPTLGKH SRDGDTLRPE NLEKEESPKR KNGCVLVPKT LRIDDPSEAA  420
KSSIWATLGI KNDSISGGGM FKAFQSKSGD KKSIAETSPV LRANPAALSR SLNFHESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47500.1	1e-115	Dof family protein