PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON93224.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

CAMTA

Protein Properties

Length: 919aa MW: 103386 Da PI: 6.8423

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON93224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	163	5.3e-51	25	142	2	118
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 ++e ++rwl+++ei+a+L n++ ++++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ e +++yYah+++ ptf rrcy PON93224.1 25 MEEaTTRWLRPNEIHAMLCNYRYFTIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDYPTFVRRCY 123 455599******************************************************************************************* PP CG-1 100 wlLeeelekivlvhylevk 118 wlL+++le+ivlvhy+e++ PON93224.1 124 WLLDKSLEHIVLVHYRETQ 142 **************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
MEGQLVGSEI HGFHTLQDLD VQSMMEEATT RWLRPNEIHA MLCNYRYFTI HVKPVNLPKS 60 GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKVG NEERIHVYYA HGQDYPTFVR 120 RCYWLLDKSL EHIVLVHYRE TQEVQGSPVT PVNSNSSSSS DPTAPWVLSE ELDSGTQNAF 180 YAGGKELPGS GETLTVRNHE QSLHDINTLE WDELLVTNDP TNSALGADKV SCFNQQNQGA 240 GNGFLSGGAS NMVAEHSSFD NLTNSTAGSG NAPGDLLNSV YVQTMEGQLN SDFQGRDSVG 300 VGTGDSLDIL VNNGLHSQDS FGRWIDGILT ESPGPVTDPV LGTSILSPQD SFVSTATGHL 360 QSPAPEQIFI ITDMSPEWAY SNEKTKILVT GFFQEQYLHL AKSNLLCVCD DIRVSTELIQ 420 VGVYRCWIPP HSPGSINLFL SIDGHKPISQ IVKLEYRPPM SSEPVTSSEE RYNWDEFRLQ 480 MQLAHLLFSS LKSLSILSGK VSPNALKEGK KFANKTSNLS NTWAVFIKSI ENETTLFPQA 540 KDNLFKLILR DRLKEWLLEK VIEGCKSTEF DVQGRGVIHL CAILGYTWAI HLFSLSGLSL 600 DFRDKHGWTA LHWAAYYGND KMVGVLLTLG AKPNLVTDPT SENPGGCTPG DLASVRGYDG 660 LAGYLSEKAL VEQFKDMSLA GNASGTLDTG ANDTVYPENL SEEQLFMKDT LAAYRTAADA 720 AARIQVAFRE HSYKIRTKAV EDSNPEDEAR SIIAAMKIQH AFRNYDTRKK IAAAARIQYR 780 FRTWKIRKDF LNLRRHTIKI QAAFRGYQVR RQYRKILWSV GILEKAVLRW RLKRKGFRGL 840 QVNPVEAVAD QGRESDTEED FYKTSQKQAE ERVERSVVRV QAMFRSKKAQ EEYHQMKVAH 900 YQAKLEYEGL FDLDTDMNG

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

MEGQLVGSEI HGFHTLQDLD VQSMMEEATT RWLRPNEIHA MLCNYRYFTI HVKPVNLPKS  60
GTIVLFDRKM LRNFRKDGHN WKKKKDGKTV KEAHEHLKVG NEERIHVYYA HGQDYPTFVR  120
RCYWLLDKSL EHIVLVHYRE TQEVQGSPVT PVNSNSSSSS DPTAPWVLSE ELDSGTQNAF  180
YAGGKELPGS GETLTVRNHE QSLHDINTLE WDELLVTNDP TNSALGADKV SCFNQQNQGA  240
GNGFLSGGAS NMVAEHSSFD NLTNSTAGSG NAPGDLLNSV YVQTMEGQLN SDFQGRDSVG  300
VGTGDSLDIL VNNGLHSQDS FGRWIDGILT ESPGPVTDPV LGTSILSPQD SFVSTATGHL  360
QSPAPEQIFI ITDMSPEWAY SNEKTKILVT GFFQEQYLHL AKSNLLCVCD DIRVSTELIQ  420
VGVYRCWIPP HSPGSINLFL SIDGHKPISQ IVKLEYRPPM SSEPVTSSEE RYNWDEFRLQ  480
MQLAHLLFSS LKSLSILSGK VSPNALKEGK KFANKTSNLS NTWAVFIKSI ENETTLFPQA  540
KDNLFKLILR DRLKEWLLEK VIEGCKSTEF DVQGRGVIHL CAILGYTWAI HLFSLSGLSL  600
DFRDKHGWTA LHWAAYYGND KMVGVLLTLG AKPNLVTDPT SENPGGCTPG DLASVRGYDG  660
LAGYLSEKAL VEQFKDMSLA GNASGTLDTG ANDTVYPENL SEEQLFMKDT LAAYRTAADA  720
AARIQVAFRE HSYKIRTKAV EDSNPEDEAR SIIAAMKIQH AFRNYDTRKK IAAAARIQYR  780
FRTWKIRKDF LNLRRHTIKI QAAFRGYQVR RQYRKILWSV GILEKAVLRW RLKRKGFRGL  840
QVNPVEAVAD QGRESDTEED FYKTSQKQAE ERVERSVVRV QAMFRSKKAQ EEYHQMKVAH  900
YQAKLEYEGL FDLDTDMNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein