PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92977.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 340aa MW: 38212.5 Da PI: 10.217

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92977.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.9	7.8e-32	268	325	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++prsYY+C+s gCp++k+ver+ edp+++++tYeg+Hnh+ PON92977.1 268 DDYSWRKYGQKPIKGSPYPRSYYKCSSLkGCPARKHVERCLEDPTMLVVTYEGDHNHS 325 99**********************998**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence
MDQIMGKAST FCVSMSSSTP RWDFKVHETA QSSLKRAHQL FNCISDKKQE KSVQEVSLIA 60 QDAIDEFKRL LTLLDNGSLP SDKKRIRKGP LPKTQDINPV ELMDSPNSSY KPLTYNSTQP 120 FISRQFFPPK SNIQATTTLI QRSSLSLIRE KQKPSYSSDQ TSTLVLPSNS IMGLSQFCQQ 180 PSNSLISMNG GSIKTHATHY SSSELLTSDV SSSMFSSKRK NGEKSEDAST KCVASTGGCH 240 CSKRRKLKKR RRIRVPSVSN KLADIPPDDY SWRKYGQKPI KGSPYPRSYY KCSSLKGCPA 300 RKHVERCLED PTMLVVTYEG DHNHSRITFQ APNLMIQVQQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	246	254	KLKKRRRIR
2	249	253	KRRRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30590.1	7e-48	WRKY family protein