PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON92953.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | YABBY | ||||||||
Protein Properties | Length: 130aa MW: 14310.5 Da PI: 7.2753 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 88.7 | 1.5e-27 | 12 | 127 | 2 | 116 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeen.lksnvekeesastsvsse 99 d+ seq+Cyv+C+fC+t+lavsvP ++lf+++tvrCGhCt+ll vn+ a + hl++s+ + +++l e + +++++++++ + PON92953.1 12 DHLPPSEQLCYVHCKFCDTVLAVSVPCSTLFQTLTVRCGHCTNLLPVNMCGLLLPSANQFHLGHSFFSPSHHNLLEEIPKpAPNFLMNHQASMADFALP 110 57789*******************************************999999999999*****9888666665554430344444445555555555 PP YABBY 100 klsenedeevprvppvi 116 +++e++r+p ++ PON92953.1 111 PRGVPHHDELSRPPVIN 127 55666666666655555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 130 aa Download sequence |
MSSSSASTLS LDHLPPSEQL CYVHCKFCDT VLAVSVPCST LFQTLTVRCG HCTNLLPVNM 60 CGLLLPSANQ FHLGHSFFSP SHHNLLEEIP KPAPNFLMNH QASMADFALP PRGVPHHDEL 120 SRPPVINRRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00180.1 | 2e-27 | YABBY family protein |