PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92869.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Nin-like

Protein Properties

Length: 932aa MW: 102149 Da PI: 5.1043

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.1	4.1e-29	527	577	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ PON92869.1 527 EKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKV 577 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 932 aa Download sequence
MSESEEETTP SFPPKSSSSS KEVVPDVREG LMDFDLDLDN PWPMMDQIAF VSNPITGNSN 60 SVAERPAENE ERKIVPSPFL GLVPVDNPNG YYLIKERMTQ ALRYLKDSTD QHVLAQIWAP 120 VKNGCRYVLT TSGQPFVLDP DSNGLHQYRM ASLMYMFSVD GETNEVLGLP GRVFRQKLPE 180 WTPNVQYYSI REYPRLDYAQ HYNVRGSLAL PVFEPSGQSC VGAVNLRSAD ILDHTSTQIC 240 NEGRQNALTE ILEILTAACE TYKLPMAQTW VPCMHRNVLA YGGGMKKNCT SIDGSCMGQV 300 CMSTTELAFY IIDAHMWGFR EACLEHHLQK GQGVAGRAFY SRNLCFCGDI TQFCKTEYPL 360 VHYARMFGLT SCFAVCLQSS HTGNDNYVLE FFLPPSITNA SEQSALLGSL LATMKKHFQS 420 LKVASGIGLE EEGIVELVKV SAIGGLESSL ECIQIPKSAE SPPGPIALPN GGDMVQQDLL 480 TQQLIVDLDT ANVGQDAAHD GGSVNHVSVS ENKETKKTSE RKRGKTEKSI SLEVLQQYFA 540 GSLKDAAKSL GVCPTTMKRI CRQHGISRWP SRKINKVNRS LSKLKRVIES VQGAEGAFGL 600 TPLATSPLPV AVASISRPST SNGTNHQHSP SNIPSEPPME RKDSPTTSSP RREGQVETED 660 QLQGGGVLSQ KEFIHENGGF FSPEINRGSN HSKSGSGSGE ASVGTPTSHG SCQGSPANGS 720 VIVKDPFVYS IHEQCIKVEG SPESAPQPTD ELHFSVPDAL VTAECQEPFG GMLIEDAGSS 780 KDLRNLCPAA DAVLDEPVPE YCWINSTCSD LAPKQTSGVI TQTQPNVIVR LRQEMKNVTI 840 KATYREDIIR FRISLSSNIV ELKDEVAKRL KLELGTFDIK YMDDDQEWVL IACDADLQEC 900 MDVCRSSGSN MIRLLIHDIM PNLGSSCEST EE

Sequence ? help Back to Top

Protein Sequence Length: 932 aa Download sequence

MSESEEETTP SFPPKSSSSS KEVVPDVREG LMDFDLDLDN PWPMMDQIAF VSNPITGNSN  60
SVAERPAENE ERKIVPSPFL GLVPVDNPNG YYLIKERMTQ ALRYLKDSTD QHVLAQIWAP  120
VKNGCRYVLT TSGQPFVLDP DSNGLHQYRM ASLMYMFSVD GETNEVLGLP GRVFRQKLPE  180
WTPNVQYYSI REYPRLDYAQ HYNVRGSLAL PVFEPSGQSC VGAVNLRSAD ILDHTSTQIC  240
NEGRQNALTE ILEILTAACE TYKLPMAQTW VPCMHRNVLA YGGGMKKNCT SIDGSCMGQV  300
CMSTTELAFY IIDAHMWGFR EACLEHHLQK GQGVAGRAFY SRNLCFCGDI TQFCKTEYPL  360
VHYARMFGLT SCFAVCLQSS HTGNDNYVLE FFLPPSITNA SEQSALLGSL LATMKKHFQS  420
LKVASGIGLE EEGIVELVKV SAIGGLESSL ECIQIPKSAE SPPGPIALPN GGDMVQQDLL  480
TQQLIVDLDT ANVGQDAAHD GGSVNHVSVS ENKETKKTSE RKRGKTEKSI SLEVLQQYFA  540
GSLKDAAKSL GVCPTTMKRI CRQHGISRWP SRKINKVNRS LSKLKRVIES VQGAEGAFGL  600
TPLATSPLPV AVASISRPST SNGTNHQHSP SNIPSEPPME RKDSPTTSSP RREGQVETED  660
QLQGGGVLSQ KEFIHENGGF FSPEINRGSN HSKSGSGSGE ASVGTPTSHG SCQGSPANGS  720
VIVKDPFVYS IHEQCIKVEG SPESAPQPTD ELHFSVPDAL VTAECQEPFG GMLIEDAGSS  780
KDLRNLCPAA DAVLDEPVPE YCWINSTCSD LAPKQTSGVI TQTQPNVIVR LRQEMKNVTI  840
KATYREDIIR FRISLSSNIV ELKDEVAKRL KLELGTFDIK YMDDDQEWVL IACDADLQEC  900
MDVCRSSGSN MIRLLIHDIM PNLGSSCEST EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein