PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON92839.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Dof
Protein Properties Length: 295aa    MW: 32194.8 Da    PI: 8.7775
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON92839.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.48.9e-4043104263
      zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                 ke+al+cprC stntkfCyynnysl+qPryfCk+CrryWt+GG+lrn+PvGgg+rknk+sss
  PON92839.1  43 KEQALNCPRCSSTNTKFCYYNNYSLTQPRYFCKNCRRYWTEGGSLRNIPVGGGSRKNKRSSS 104
                 7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MDTAQWPQEI VVKPIEEIVI NSCPKPQVPS SAGNLERKTR PQKEQALNCP RCSSTNTKFC  60
YYNNYSLTQP RYFCKNCRRY WTEGGSLRNI PVGGGSRKNK RSSSSTTSSS KMITRLPDLV  120
HPSSTSQLIN QAQDLNLGFP PINSQVQLPN IENNKTHVSP SNTSPTSTST TSNTTTANTT  180
TTHFSALELL TGLTSRGFNS FMPIPVPDPN STSVYTSGFP LVPEFKPSLN FSLDGLGSTA  240
YGSLPSVQET NSGRLLFPFE DLKQISSTNS GIEQNTKEQG DSTGYWTGML GGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61850.44e-52Dof family protein