PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON92795.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 198aa MW: 22615.1 Da PI: 7.2969 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.7 | 2.7e-20 | 9 | 63 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +f++eq++ Le +F++++ p +++++LA +lgL+ rqV +WFqNrRa+ + PON92795.1 9 KNKKRFSDEQIKSLEVMFRSDSRPESRTKQQLAGELGLQPRQVAIWFQNRRARSR 63 56789************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 111.5 | 5.7e-36 | 10 | 101 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+r+s+eq+k+LE +F+++++ e++ K++la eLglqprqva+WFqnrRAR +tkq+E++y++Lk++y++l+++ e+L++e+++L+ +l+e PON92795.1 10 NKKRFSDEQIKSLEVMFRSDSRPESRTKQQLAGELGLQPRQVAIWFQNRRARSRTKQIEREYSKLKASYNTLVSSVESLKRENQALNIQLQE 101 79*************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MNTLTCGGKN KKRFSDEQIK SLEVMFRSDS RPESRTKQQL AGELGLQPRQ VAIWFQNRRA 60 RSRTKQIERE YSKLKASYNT LVSSVESLKR ENQALNIQLQ EAKTVLRKDQ GSGSLESDET 120 GNGRENPFES KDVRSQNLLQ SCKREVEVHH ENVGKEAEFL DLAPSADGSL TSSVDWRGFE 180 SGCYVDESSC SPWWEFWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 5e-43 | HD-ZIP family protein |