PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92771.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HD-ZIP

Protein Properties

Length: 194aa MW: 22106.6 Da PI: 6.6496

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.2	2.8e-18	20	73	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+ +++++q++ Le+ F +++++ e++ +LA++lg++ rqV vW+qN+Ra+++ PON92771.1 20 KKKRLNEDQVRLLERSFTFDKKLDPERKLQLADQLGIPPRQVAVWYQNKRARWR 73 566799***********************************************9 PP
2	HD-ZIP_I/II	107.5	9.8e-35	19	111	1	93
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +kk+rl+++qv+lLE+sF+ ++kL+perK +la +Lg+ prqvavW+qn+RAR++++ lE d++aL+ ++++ +e+++Le +ve Lreel++ PON92771.1 19 NKKKRLNEDQVRLLERSFTFDKKLDPERKLQLADQLGIPPRQVAVWYQNKRARWRAQTLELDCSALQLKLETALAEKRQLEGDVEMLREELEK 111 59****************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MDLFQTQSHK NSYYNSKHNK KKRLNEDQVR LLERSFTFDK KLDPERKLQL ADQLGIPPRQ 60 VAVWYQNKRA RWRAQTLELD CSALQLKLET ALAEKRQLEG DVEMLREELE KARQSLFAVG 120 VSVVDHQKAH PPATTVCSVS DGGSSSGSFG DQYVIDLDHD HGHGQGQGQG HGHGHDHDQV 180 LQMDHELFAS LIDW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	1e-31	HD-ZIP family protein