PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON92180.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

AP2

Protein Properties

Length: 664aa MW: 74167.9 Da PI: 6.9851

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON92180.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.1	1.7e-11	325	381	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g rk + g ++ +e+Aa+ ++ a++k++g PON92180.1 325 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqSRKGRQ-GGYDMEEKAARSYDLAALKYWG 381 78*****************87776664446655.77****************98 PP
2	AP2	46	1.3e-14	426	475	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PON92180.1 426 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 475 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 664 aa Download sequence
MKSITNDENN NNNNSSNNNW LGFSLSPNMK MEVPSSDPHN NHHYHHHHQN QTQQPSSSSA 60 QTSFFHSSPQ LNYGLYYGVE GENGGLYSPL SVMPLKSDGS LCIMEALTRS QPQAMVTTST 120 PKLEDFFGSG TMGSHHYESN DREVMALSLD NSMFFDQNPE HEEPNHHQNL LNQLQQQSSR 180 HRDQAQHIQA QQQYSYYSGL RNHDIADCNL QLPTMADNGI PEMKNWVPRN YSGNHGLEHK 240 MIGCMTENGG ESGSIGGMAY GDLQSLSLSM SPGSQSSCVT GSQQQISPTV TDCVAIDTKK 300 RGPEKVDQKQ IVHRKSLDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQSRKGRQG 360 GYDMEEKAAR SYDLAALKYW GPSTHINFPL ENYQKELEEM KNMTRQEYVA HLRRKSSGFS 420 RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT 480 NFDITRYDVD RIMASNTLLA GELAKRTKEA AVSAIEAANQ NSASSSINGE TIIPKKSNEG 540 ESDWKMALYH SSTQQFDQKP LSMDTYKAES FSVATENLIQ QEVEESGKMG THLSNASSLV 600 TSLSSSREAS PDKSSLPSLY GVPPSVSKFF TNPTNAVNSW IPSTQQRPAL SMPHMPIFAA 660 WTDT

Sequence ? help Back to Top

Protein Sequence Length: 664 aa Download sequence

MKSITNDENN NNNNSSNNNW LGFSLSPNMK MEVPSSDPHN NHHYHHHHQN QTQQPSSSSA  60
QTSFFHSSPQ LNYGLYYGVE GENGGLYSPL SVMPLKSDGS LCIMEALTRS QPQAMVTTST  120
PKLEDFFGSG TMGSHHYESN DREVMALSLD NSMFFDQNPE HEEPNHHQNL LNQLQQQSSR  180
HRDQAQHIQA QQQYSYYSGL RNHDIADCNL QLPTMADNGI PEMKNWVPRN YSGNHGLEHK  240
MIGCMTENGG ESGSIGGMAY GDLQSLSLSM SPGSQSSCVT GSQQQISPTV TDCVAIDTKK  300
RGPEKVDQKQ IVHRKSLDTF GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQSRKGRQG  360
GYDMEEKAAR SYDLAALKYW GPSTHINFPL ENYQKELEEM KNMTRQEYVA HLRRKSSGFS  420
RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT  480
NFDITRYDVD RIMASNTLLA GELAKRTKEA AVSAIEAANQ NSASSSINGE TIIPKKSNEG  540
ESDWKMALYH SSTQQFDQKP LSMDTYKAES FSVATENLIQ QEVEESGKMG THLSNASSLV  600
TSLSSSREAS PDKSSLPSLY GVPPSVSKFF TNPTNAVNSW IPSTQQRPAL SMPHMPIFAA  660
WTDT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-128	AP2 family protein