PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON91800.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ARF
Protein Properties Length: 815aa    MW: 91551.2 Da    PI: 7.0335
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON91800.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3758.7e-24135236199
                 EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+k+lt sd++++g +++ k++a+e+     ++k++ +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++el+v
  PON91800.1 135 FCKTLTASDTSTHGGFSVLKRHADEClprldMSKQPPHQELVAKDLHGNEWRFRHIFRGHPKRHLLQSGWSLFVSSKKLIAGDAFIFL--RGENGELRV 231
                 99*****************************444455669************************************************..449999*** PP

                 EEE-S CS
          B3  95 kvfrk 99 
                 +v+r+
  PON91800.1 232 GVRRA 236
                 **996 PP
2Auxin_resp115.64.4e-38261343183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 a+ha+st+++F+v+Y+Pr+s++eF+++v+++++++k+++ +GmRfkm+fe+e+++e+r+sGtv+g++d++pvrW++SkWr+Lk
  PON91800.1 261 AWHAVSTGTMFSVYYKPRTSPAEFIIPVAEYMESIKNNYPMGMRFKMKFEGEEAQEQRFSGTVIGTEDANPVRWRGSKWRCLK 343
                 89*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 815 aa     Download sequence    
MMMECNSNTC NNNNEKKEMI DDEDALFKEL WHACAGPLVT VPSRGHQVFY FPQGHIEQVE  60
ASTNQVVVDQ QMPAYDLPPK ILCRVINVQL KAELDTDEVF AQVTLLPEDK QDGNLAVKES  120
SLPSPSPPRP RVYSFCKTLT ASDTSTHGGF SVLKRHADEC LPRLDMSKQP PHQELVAKDL  180
HGNEWRFRHI FRGHPKRHLL QSGWSLFVSS KKLIAGDAFI FLRGENGELR VGVRRAMRQP  240
STVSSSVISS HSMHIGVLAT AWHAVSTGTM FSVYYKPRTS PAEFIIPVAE YMESIKNNYP  300
MGMRFKMKFE GEEAQEQRFS GTVIGTEDAN PVRWRGSKWR CLKVRWDENS PVRRPERVSP  360
WKIEPVSTHA LDTLPGCHMK RSRVSISSST TSFLHAAEGS SKINLETSTR NEFSRAFQGQ  420
DLSTLSGVFP QNHESDAENV TLLSPLQGKD ERDALFGKRR LAPDDRVTQI RLGPQYMNEM  480
FDSRALQESY APGWPLDHQN TANVNELQKK ASDRESIFDL SANPASSTHL SSSSKIMEHN  540
KQPPGGEVNE SQNPNPGNGK YEGMHGLEVK RQKGNWSLPL LQTSHAENSN PLAILNMENL  600
PMQQDLIANE NGKCKLFGIS LVGNPVMAGH GPQGPTDVAS EHHRDLGSPQ VRISKFSEST  660
SGRVEKRKRF QVLKQFSRDS QVNLQGGSTR SCIKVHKQGT ALGRSVDLSK FNGYNELIAE  720
LDQIFEFNGE LIEPKRNWLI VFTDDEGDMM LVGDDPWEEF CHLVRKISIY TREEVKKMDL  780
QKANPKQDVI SVIVADQRIG SEEDRSFDHP CAASP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein