PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON91792.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Trihelix
Protein Properties Length: 337aa    MW: 37160.3 Da    PI: 5.2239
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON91792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.83.8e-2546140186
    trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rWt+qe+l+Li+++   e++ rr +         + +p+W++vs+++r +g++r+p+qC+++w+nl+++ykkike+e +r+++s s +++ ++l+
  PON91792.1  46 RWTRQEILVLIQGKWVAESKNRRIRtagaafgsgQVEPKWASVSSYCRMHGVNRGPVQCRKRWSNLAGDYKKIKEWELQRKDGSDSFWAMRNDLR 140
                 8*************99998888743344566666**********************************************999999999999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MALEQLSLPT TNPVDGEPDG VTNGVDARPP STDGGDDGSR APRLPRWTRQ EILVLIQGKW  60
VAESKNRRIR TAGAAFGSGQ VEPKWASVSS YCRMHGVNRG PVQCRKRWSN LAGDYKKIKE  120
WELQRKDGSD SFWAMRNDLR RERKLPGFFD KEVYDILDAG SGATQQTALV VAPPAPEEEK  180
EPGTEEPEET VAMFDSRRGA TAEDGMFSDF EQDESGRSPE KEPPAAKEGP GTSIGIPAMP  240
ISGAANEKQP ASNPEIGSTS HEGRKRKRFV FDGDDETSLQ NQLIDVLERN GKVLASHLDA  300
QNTHFQLDRE QRKSHTDSLV AVLNKLADAL VRISEKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-108Trihelix family protein