PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON91702.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C3H
Protein Properties Length: 736aa    MW: 79949.5 Da    PI: 6.3102
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON91702.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.54.1e-07308328526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                 +C+ f++ G C++Gd C +aHg
  PON91702.1 308 PCPEFRK-GACRRGDMCEYAHG 328
                 8******.*************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    
MCCGSEKLKS ISSPTPSPIS FDESRVTNIA MNHLTVETED TFASLLELAA NNDIEGFKRS  60
IERDPSSIDE TGLWYGRQKG SKLMVNEQRT PLMVAATYGS IDVIKLILSL SAADVNRHCG  120
LDRSTALHCA ASGGAENAVD VVKLLMAAGA DPNLVDGNGQ SPVDAIVVPP KLQDVKLALE  180
ELLKTNGSAV ECFLTVSTRT LNSSSPTLSS SSENGSPLAQ DFVSSPSKLK YNDFPVSSLS  240
EKKEYPVDPS LPDIKNSIYS TDEFRMYSFK VRPCSRAYSH DWTECPFVHP GENARRRDPR  300
KFHYSCVPCP EFRKGACRRG DMCEYAHGVF ECWLHPAQYR TRLCKDGTSC ARRVCFFAHT  360
PEELRPLYVS TGSAVPSPRT GTSGAAAMDF AAAMSMLPGS PSSMSVMSPS PFTPPISPSA  420
NGMSHSSMGW PQPNVPALHL PGSNLQSSRL RSSLNARDIP AEDFDLLPDF DVQQQQQLLN  480
ELSCLSQPSL SSNSLNRSGR LKTLTPSNLD DLFSAESSSP RYSDQALQSA VFSPTHKSAV  540
INQFQQQQSM LSPINTNFSP KNVEHPLLHQ ASFGVPSSGR MSPRNLEPIS PMGSRVSMLA  600
QREKQQQFRS LSSRELGSNS ASMVGSPVNS WSKWGSSNGK PDWAVSADEL GKLRRSSSFE  660
LGNNGEEPDL SWVQSLVKES PTEMKEKSTA PVSGVSASTS SSDGSNVNSQ MESVDHAVLG  720
AWLEQMQLDH LVAQQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41900.10.0C3H family protein