PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91664.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

AP2

Protein Properties

Length: 391aa MW: 43362.6 Da PI: 10.1503

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	23.3	1.7e-07	45	97	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV k + +vA+ +++ng + k+ + +f+ +e Aa+a++ +k++g PON91664.1 45 SKYRGVQKIKDKETYVAH---VYDNGYSpKQGRTRRFDKEENAARAHDLVSLKFWG 97 89******9999...66688457999999***********98888776 PP
2	AP2	30.1	1.2e-09	140	188	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV ++ ++g+W A+ + lg+f t+eeAa a + a kl+g PON91664.1 140 SKYRGVVRHANSGKWQAR---K-----GpgRDSFLGTFETEEEAAIAFDIASIKLKG 188 89**************...5.....33488889*************9999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
MEFFNSSGRS SSSQPTHPIN LAFPPFDGTT DFGILESPIF KLKSSKYRGV QKIKDKETYV 60 AHVYDNGYSP KQGRTRRFDK EENAARAHDL VSLKFWGTSI QTNFPKTDYV KAVEAMANMN 120 DQDVVAAVRR SSNSFSRGKS KYRGVVRHAN SGKWQARKGP GRDSFLGTFE TEEEAAIAFD 180 IASIKLKGIK AITNFDIKSY NVRAILEGKT EPGNIRAEKV VNHAETFVVS TIQEKPESSL 240 SNTGIGSRKK KRSLTFHGFL GKQAETGFSG NINSLRGNPV TAPAGSEFQH GNKIPFSPET 300 ISIGFSTEPR ASWDLGFKHS NSSAFQSYEQ AKPRESLVLQ EANNQSPVFK ILGSDVYLPN 360 KTNLFEEKDI QCLQGGFQHA SSSCFKPFQK L

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

MEFFNSSGRS SSSQPTHPIN LAFPPFDGTT DFGILESPIF KLKSSKYRGV QKIKDKETYV  60
AHVYDNGYSP KQGRTRRFDK EENAARAHDL VSLKFWGTSI QTNFPKTDYV KAVEAMANMN  120
DQDVVAAVRR SSNSFSRGKS KYRGVVRHAN SGKWQARKGP GRDSFLGTFE TEEEAAIAFD  180
IASIKLKGIK AITNFDIKSY NVRAILEGKT EPGNIRAEKV VNHAETFVVS TIQEKPESSL  240
SNTGIGSRKK KRSLTFHGFL GKQAETGFSG NINSLRGNPV TAPAGSEFQH GNKIPFSPET  300
ISIGFSTEPR ASWDLGFKHS NSSAFQSYEQ AKPRESLVLQ EANNQSPVFK ILGSDVYLPN  360
KTNLFEEKDI QCLQGGFQHA SSSCFKPFQK L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	2e-44	AP2 family protein