PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91592.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 483aa MW: 53646.4 Da PI: 6.6451

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91592.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.2	1.2e-07	407	440	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + PON91592.1 407 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 440 469*****************************87 PP
2	ELK	28.6	3.2e-10	361	382	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ PON91592.1 361 ELKHELKQGYKEKIVDIREEIL 382 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MAYHNHLSSQ DLPLHHHHHH HHHHFGDQTQ QQQQNHTILP DQLAIAHSSP DPTSKSVQTA 60 ASAPNWLNSA LLRTQPHAHF ADNANGNSHV SNSNNNTNFL NLHTASDSAN SGQASNQWLS 120 RPILQRNHSD VIDDVAAAAA AAAAAGESMI GGAMSHDSAA EMKAATAANG ENNLNKSEGV 180 VVESGGDGGV INWQNARYKA EILSHPLYDQ LLSAHVACLR IATPVDQLPR IDAQLAQSQN 240 VVAKYSALGQ GLVGDDKELD QFMTHYVLLL CSFKEQLQQH VRVHAMEAVM ACWEIEQSLQ 300 SLTGVSPGEG TGATMSDDDD DQVDSDANLF DGSLDGHDSM GFGPLIPTES ERSLMERVRQ 360 ELKHELKQGY KEKIVDIREE ILRKRRAGKL PGDTTSVLKA WWQSHSKWPY PTEEDKARLV 420 QETGLQLKQI NNWFINQRKR NWHSNPSTST VLKSKRKRYS LHDQFKFQTN TMQFSRLVDS 480 HFS

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MAYHNHLSSQ DLPLHHHHHH HHHHFGDQTQ QQQQNHTILP DQLAIAHSSP DPTSKSVQTA  60
ASAPNWLNSA LLRTQPHAHF ADNANGNSHV SNSNNNTNFL NLHTASDSAN SGQASNQWLS  120
RPILQRNHSD VIDDVAAAAA AAAAAGESMI GGAMSHDSAA EMKAATAANG ENNLNKSEGV  180
VVESGGDGGV INWQNARYKA EILSHPLYDQ LLSAHVACLR IATPVDQLPR IDAQLAQSQN  240
VVAKYSALGQ GLVGDDKELD QFMTHYVLLL CSFKEQLQQH VRVHAMEAVM ACWEIEQSLQ  300
SLTGVSPGEG TGATMSDDDD DQVDSDANLF DGSLDGHDSM GFGPLIPTES ERSLMERVRQ  360
ELKHELKQGY KEKIVDIREE ILRKRRAGKL PGDTTSVLKA WWQSHSKWPY PTEEDKARLV  420
QETGLQLKQI NNWFINQRKR NWHSNPSTST VLKSKRKRYS LHDQFKFQTN TMQFSRLVDS  480
HFS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	438	458	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	0.0	TALE family protein