PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91297.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 293aa MW: 33673 Da PI: 6.622

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.6e-09	220	254	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ PON91297.1 220 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 254 569*****************************885 PP
2	ELK	41.5	2.8e-14	174	195	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ PON91297.1 174 ELKGQLLRKYSGYLGSLKQEFM 195 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MVDDHHNHHQ HQNNNSNINP TGGCYFMAEN NNDSTNISSF KAKIMAHPHY HRLLAAYVNC 60 QKVGAPPEVV ARLEEACSSA AVMGHMSTGC LGEDPALDQF MEAYCEMLTK YEQELSKPFK 120 EAMLFLQRIE CQFKALTLSS DSACCEANID RTGSSEEEVD VNNNFIDPQA EDRELKGQLL 180 RKYSGYLGSL KQEFMKKRKK GKLPKEARQQ LLDWWSRHYK WPYPSESQKL ALAESTGLDQ 240 KQINNWFINQ RKRHWKPSED MQFVVMDAAH PHHYYMDNVL GNPFPMDISP ALL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	199	LKQEFMKKRK
2	196	200	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-146	TALE family protein