PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON91226.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TCP

Protein Properties

Length: 281aa MW: 28828 Da PI: 10.5909

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON91226.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.9	7.4e-38	47	126	2	82
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssa 82 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s s+ + PON91226.1 47 AVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFS-SVSLSVRG 126 78******************************************************************9777.22222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MSNTDVGGTN GVSNGALIDP NQRQQQQQQQ QQQQTAVTAS AGNGALAVKK PPSKDRHSKV 60 DGRGRRIRMP IICAARVFQL TRELGHKSDG QTIEWLLRQA EPSIIAATGT GTTPASFSSV 120 SLSVRGSAGA GLGGVSASLS TSSANSGSLD HKPLLGPTPF ILGKRVRRDD GSGVGKDGHD 180 GGNDGVSLVG AAMGSMVGSG TTAPGGFWAP HFGQVWSFAA APQEMVAQPA VSQQQSLFVQ 240 QQTIGEASAA RVGNYLPGHL NLLASLSGGP GSSGRREDDP R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-54	TCP family protein