PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON90299.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NF-YB | ||||||||
Protein Properties | Length: 200aa MW: 20723.9 Da PI: 6.9604 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 185.8 | 3.4e-58 | 17 | 112 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfedyveplk+yl+k+re+egek PON90299.1 17 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQKFREMEGEK 112 89********************************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 200 aa Download sequence |
MADSDNDSGG PNSASPREQD RFLPIANVSR IMKKALPANA KISKDAKETV QECVSEFISF 60 ITGEASDKCQ REKRKTINGD DLLWAMTTLG FEDYVEPLKI YLQKFREMEG EKTAALGRGG 120 GGGLDSVSGG DTNALIGGGS GGGGGGGGGY GSSGGGGGMY GHSSGVQMMM MGQHQHIHHH 180 HHNMFGSSGG GSGTSTGRPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 6e-75 | NF-YB family protein |