PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON89823.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | GATA | ||||||||
Protein Properties | Length: 304aa MW: 32614.1 Da PI: 6.6392 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.1 | 2.1e-17 | 215 | 251 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cgt++ Tp++Rrgp+g+++LCnaCGl+++ +g+ PON89823.1 215 CTHCGTSSksTPMMRRGPSGPRSLCNACGLFWANRGT 251 *********************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 304 aa Download sequence |
MYGHAHPMTM PNQIATVDDD DGPSPVAGAE SVDNPHIHHY DAHALDDTAG GVPAGAGGVV 60 EDVNPDAVYG AAAGHDLVVQ RIDGSSQLTL SFRGQVYVFD AVTPDKVQAV LLLLGGCEIS 120 AGAQGVGMPS QNHRAMVDLP ARCSQPHRAA SLSRFRQKRK ERCFDKKVRY SVRQEVALRM 180 QRNKGQFTSK KSDGTYSWGN GQDSGPDDNP LETSCTHCGT SSKSTPMMRR GPSGPRSLCN 240 ACGLFWANRG TLRDLSKKTQ DHSQTPVEQG EGEASDSNCE TTMRTHNNLV TFSNGDSSAL 300 MAEQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.2 | 1e-91 | GATA family protein |