PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON89621.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NAC
Protein Properties Length: 237aa    MW: 27206.7 Da    PI: 7.9589
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON89621.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.97.6e-1427259128
         NAM  59 yfFskrdkkya.tgkrknratksgyWk.atgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                  fF++r++ky  +g+r++    +gyWk a+ ++k++++  + ++g  ++L++y+g ++++ +ktdW+m eyr+
  PON89621.1   2 CFFTQRNHKYYlKGSRTKN-SGHGYWKlASQSEKPIKK-ANCTIGFIRSLIYYRGnKTKHETKTDWIMYEYRV 72 
                 6999999998835666666.688****66666777777.9999**********995666778*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MCFFTQRNHK YYLKGSRTKN SGHGYWKLAS QSEKPIKKAN CTIGFIRSLI YYRGNKTKHE  60
TKTDWIMYEY RVNTQLNYAD KLANSSATPP QSTNKLAEWV LCKVYNKNKM INKVQDAQVM  120
LEKPVVLEAV QDLEPEFPNS FIQDLVKELL TDSDPIALNE DQSEHYLIDN IPVLSGIYGN  180
ECIKLQANES STSSTAYNVP DHLIPAEEIN VITSRKSKSS NNEHRDFASE YFKGQFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.12e-17NAC family protein