PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON89224.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

AP2

Protein Properties

Length: 570aa MW: 62969.7 Da PI: 7.024

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON89224.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.5	2.4e-11	177	233	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g PON89224.1 177 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEEKAARAYDLAALKYWG 233 57*****************5444.2455536655.779999************98 PP
2	AP2	47	6.3e-15	278	327	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g PON89224.1 278 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 327 9*************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MGSMNSNNWL SFPLSPTHPS LPSHLHTSQS HQFSLGLVND NMDNPFQNQA DWNLINSHSS 60 SEVPKVADFL GVTKSENQTD LVPFNEVHHQ ANDADYLFPH NSIVQAVQQT VNVAAASTST 120 YDFQENPSNL QALTLSMGSG KGSSTCETRS DNISTNSTTA VEAAPRRTLD TFGQRTSIYR 180 GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEEKA ARAYDLAALK YWGTSTTTNF 240 PISNYEKELE DMKHMTRQEF VASIRRKSSG FSRGASMYRG VTRHHQHGRW QARIGRVAGN 300 KDLYLGTFST EEEAAEAYDI AAIKFRGLNA VTNFDMNRYD VKSILESNTL PIGGGAAKRL 360 KEAQALESSR KREEMIALSS AYQYGSPGST SSGSNNRLQA FSLLQPPQAT SLIDMPHLSL 420 QNDMSHHYAN HHHHHDHHHD HQDPSLIHQN YIQTQLQLHQ HQANHHHHHQ FYANGYNNSN 480 SIQNHPAFLQ GLMENIGTTS SVVDNSGNSG GSYSGGYGLG MASSSAAGNA EAELALVKVD 540 YDMPSGNYGA WSASGSGNGS NPGGFTMWND

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MGSMNSNNWL SFPLSPTHPS LPSHLHTSQS HQFSLGLVND NMDNPFQNQA DWNLINSHSS  60
SEVPKVADFL GVTKSENQTD LVPFNEVHHQ ANDADYLFPH NSIVQAVQQT VNVAAASTST  120
YDFQENPSNL QALTLSMGSG KGSSTCETRS DNISTNSTTA VEAAPRRTLD TFGQRTSIYR  180
GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEEKA ARAYDLAALK YWGTSTTTNF  240
PISNYEKELE DMKHMTRQEF VASIRRKSSG FSRGASMYRG VTRHHQHGRW QARIGRVAGN  300
KDLYLGTFST EEEAAEAYDI AAIKFRGLNA VTNFDMNRYD VKSILESNTL PIGGGAAKRL  360
KEAQALESSR KREEMIALSS AYQYGSPGST SSGSNNRLQA FSLLQPPQAT SLIDMPHLSL  420
QNDMSHHYAN HHHHHDHHHD HQDPSLIHQN YIQTQLQLHQ HQANHHHHHQ FYANGYNNSN  480
SIQNHPAFLQ GLMENIGTTS SVVDNSGNSG GSYSGGYGLG MASSSAAGNA EAELALVKVD  540
YDMPSGNYGA WSASGSGNGS NPGGFTMWND

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51190.1	0.0	AP2 family protein