PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON89120.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

AP2

Protein Properties

Length: 761aa MW: 81758.5 Da PI: 6.7401

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON89120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35	3.7e-11	306	362	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g PON89120.1 306 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 362 57*****************4444.2455535555.779999************98 PP
2	AP2	46.5	8.9e-15	405	456	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g PON89120.1 405 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 456 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 761 aa Download sequence
MGSMNWLGFS LSPQEPHHHH HHDHQDHSQS TVSHRLGGFN SDEISGNDVS GAECFDLTSD 60 STAPSLNQLP PPFGILEAFN RSNNHSQDWN NMNSVSETNY KTSSSDLSML MGGSQSHQHE 120 PKLENFLGRH SFANHDHHHT YSTNGTADYM FPALNVPSEA AAAADAANNN GSASGGGNNN 180 NNNGSSIGLS MIKTWLRNQP APTQPGEAAK NVDGGGGAGA TSSHQALSLS MSTGSQSNSA 240 LPLLTAGGGS GGDSSSLSDS SNKQPRTTTT MTTTTAATAT GGLDSQTTAI EAVPRKSIDT 300 FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQTRKGRQ GGYDKEEKAA RAYDLAALKY 360 WGTTTTTNFP ISNYEKELEE MKHMTRQEYV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ 420 ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV KSILESSTLP 480 IGGAAKRLKD VEQAEMTVDG QRTDVDDTMS SQLTDAISNY GAAAAAAAAA HHGGWPTLAF 540 QQAHHQPFTM HNYPYGQRLW CKQEVQDSDT HSGFHDSGLH HQLQLGNTHN FFQPNSSVLH 600 NLMGMDSSSM EHSSGSNSVL YSNGGSGDHH GNGNGVGYGN GTGGYVVPLA TVISNDVVGN 660 QSQGHNSNNN NSSSMNNGFA DHENVFIGSS STSTDPYSHA RSLYYLSQQS QVGVVKASST 720 AYDQGSACSN NWVPTAVPTF GSRSNINMAA AVPTFTVWND T

Sequence ? help Back to Top

Protein Sequence Length: 761 aa Download sequence

MGSMNWLGFS LSPQEPHHHH HHDHQDHSQS TVSHRLGGFN SDEISGNDVS GAECFDLTSD  60
STAPSLNQLP PPFGILEAFN RSNNHSQDWN NMNSVSETNY KTSSSDLSML MGGSQSHQHE  120
PKLENFLGRH SFANHDHHHT YSTNGTADYM FPALNVPSEA AAAADAANNN GSASGGGNNN  180
NNNGSSIGLS MIKTWLRNQP APTQPGEAAK NVDGGGGAGA TSSHQALSLS MSTGSQSNSA  240
LPLLTAGGGS GGDSSSLSDS SNKQPRTTTT MTTTTAATAT GGLDSQTTAI EAVPRKSIDT  300
FGQRTSIYRG VTRHRWTGRY EAHLWDNSCR REGQTRKGRQ GGYDKEEKAA RAYDLAALKY  360
WGTTTTTNFP ISNYEKELEE MKHMTRQEYV ASLRRKSSGF SRGASIYRGV TRHHQHGRWQ  420
ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGLNAV TNFDMSRYDV KSILESSTLP  480
IGGAAKRLKD VEQAEMTVDG QRTDVDDTMS SQLTDAISNY GAAAAAAAAA HHGGWPTLAF  540
QQAHHQPFTM HNYPYGQRLW CKQEVQDSDT HSGFHDSGLH HQLQLGNTHN FFQPNSSVLH  600
NLMGMDSSSM EHSSGSNSVL YSNGGSGDHH GNGNGVGYGN GTGGYVVPLA TVISNDVVGN  660
QSQGHNSNNN NSSSMNNGFA DHENVFIGSS STSTDPYSHA RSLYYLSQQS QVGVVKASST  720
AYDQGSACSN NWVPTAVPTF GSRSNINMAA AVPTFTVWND T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-133	AP2 family protein